Literature DB >> 6567469

Nitrogen-15-labeled yeast tRNAPhe: double and two-dimensional heteronuclear NMR of guanosine and uracil ring NH groups.

S Roy, M Z Papastavros, V Sanchez, A G Redfield.   

Abstract

5N1-Labeled hypoxanthine and 1,3-15N-labeled uracil were synthesized chemically and used to prepare labeled yeast tRNAPhe biosynthetically. Maps (500 MHz) of 15N chemical shift vs. proton chemical shift were obtained, for each ring NH group, by means of INDOR (difference heterodecoupling) and also by means of a proton-observe two-dimensional method involving coherences of forbidden resonances of the NH system. Resonances of GC11, T54-m1A58, GU4, and A psi 31 were confirmed, assigned, or reassigned. psi 39 was found to be in anti conformation, not syn as previously stated. Almost all the uracil NH group resonances could be separated, but most of the GC resonances are too close even in two dimensions to be separately resolved with the observed 20-Hz 15N line width.

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Year:  1984        PMID: 6567469     DOI: 10.1021/bi00314a024

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Long-range imino proton-13C J-couplings and the through-bond correlation of imino and non-exchangeable protons in unlabeled DNA.

Authors:  A T Phan
Journal:  J Biomol NMR       Date:  2000-02       Impact factor: 2.835

2.  Properties of pseudouridine N1 imino protons located in the major groove of an A-form RNA duplex.

Authors:  K B Hall; L W McLaughlin
Journal:  Nucleic Acids Res       Date:  1992-04-25       Impact factor: 16.971

3.  Triple resonance three-dimensional protein NMR: before it became a black box.

Authors:  Ad Bax
Journal:  J Magn Reson       Date:  2011-08-31       Impact factor: 2.229

4.  Measurement of the exchange rates of rapidly exchanging amide protons: application to the study of calmodulin and its complex with a myosin light chain kinase fragment.

Authors:  S Spera; M Ikura; A Bax
Journal:  J Biomol NMR       Date:  1991-07       Impact factor: 2.835

5.  15N-labeled P22 c2 repressor for nuclear magnetic resonance studies of protein-DNA interactions.

Authors:  H Senn; A Eugster; G Otting; F Suter; K Wüthrich
Journal:  Eur Biophys J       Date:  1987       Impact factor: 1.733

6.  Stabilization of RNA stacking by pseudouridine.

Authors:  D R Davis
Journal:  Nucleic Acids Res       Date:  1995-12-25       Impact factor: 16.971

7.  Proton NMR measurements of bacteriophage T4 lysozyme aided by 15N isotopic labeling: structural and dynamic studies of larger proteins.

Authors:  L P McIntosh; R H Griffey; D C Muchmore; C P Nielson; A G Redfield; F W Dahlquist
Journal:  Proc Natl Acad Sci U S A       Date:  1987-03       Impact factor: 11.205

8.  Isotope-detected 1H NMR studies of proteins: a general strategy for editing interproton nuclear Overhauser effects by heteronuclear decoupling, with application to phage lambda repressor.

Authors:  M A Weiss; A G Redfield; R H Griffey
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

9.  Measurement of intrinsic exchange rates of amide protons in a 15N-labeled peptide.

Authors:  S Koide; W Jahnke; P E Wright
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

10.  Nuclear magnetic resonance observation of the triple interaction between A9 and AU12 in yeast tRNAPhe.

Authors:  B S Choi; A G Redfield
Journal:  Nucleic Acids Res       Date:  1985-07-25       Impact factor: 16.971

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