Literature DB >> 6429339

Evidence for the wide distribution of repetitive DNA sequences in the genus Streptomyces.

K Usdin, K Gertsch, R Kirby.   

Abstract

Repeated DNA sequences were detected as rapidly reannealing sequences in the chromosomal DNA of 13 out of 14 Streptomyces species using either hypochromicity measurements or hydroxyapatite chromatography. These sequences made up between approximately 4% and 11% of the total DNA of these species; only in Streptomyces rimosus were repeated DNA sequences not detected. The repeated sequences fall into a number of distinct percentage G + C (%G + C) classes, many being of rather low %G + C. Analytical density ultracentrifugation of the DNA of these species indicated satellite bands of low %G + C, and high-resolution thermal denaturation profiles indicated the presence of blocks of DNA of low G + C content too. No such satellite band could be found in Streptomyces coelicolor and no low-%G + C DNA could be detected in its thermal denaturation profile. The possible relationship of this repeated DNA, an unusual occurrence in a procaryote, to genetic instability and genetic control mechanisms in Streptomyces is discussed.

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Year:  1984        PMID: 6429339     DOI: 10.1007/bf02101982

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  15 in total

1.  Estimate of the genome size by renaturation studies in Streptomyces.

Authors:  R Benigni; P A Petrov; A Carere
Journal:  Appl Microbiol       Date:  1975-08

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Characterization of families of repeated DNA sequences from four vascular plants.

Authors:  A J Bendich; R S Anderson
Journal:  Biochemistry       Date:  1977-10-18       Impact factor: 3.162

4.  Application of higher derivative techniques to analysis of high-resolution thermal denaturation profiles of reassociated repetitive DNA.

Authors:  R E Cuellar; G A Ford; W R Briggs; W F Thompson
Journal:  Proc Natl Acad Sci U S A       Date:  1978-12       Impact factor: 11.205

5.  Length-independent separation of DNA restriction fragments in two-dimensional gel electrophoresis.

Authors:  S G Fischer; L S Lerman
Journal:  Cell       Date:  1979-01       Impact factor: 41.582

6.  Kinetics of renaturation of DNA.

Authors:  J G Wetmur; N Davidson
Journal:  J Mol Biol       Date:  1968-02-14       Impact factor: 5.469

7.  Unstable naturally occurring resistance to antibiotics in streptomyces.

Authors:  R F Freeman; D A Hopwood
Journal:  J Gen Microbiol       Date:  1978-06

8.  Occurrence of reiterated DNA sequences in strains of Streptomyces produced by an interspecific protoplast fusion.

Authors:  M Robinson; E Lewis; E Napier
Journal:  Mol Gen Genet       Date:  1981

9.  Plasmid loss and changes within the chromosomal DNA of Streptomyces reticuli.

Authors:  H Schrempf
Journal:  J Bacteriol       Date:  1982-08       Impact factor: 3.490

10.  Characterization of deoxyribonucleic acids from streptomycetes and nocardiae.

Authors:  E M Tewfik; S G Bradley
Journal:  J Bacteriol       Date:  1967-12       Impact factor: 3.490

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  4 in total

1.  Relationship of an unstable argG gene to a 5.7-kilobase amplifiable DNA sequence in Streptomyces lividans 66.

Authors:  M Betzler; P Dyson; H Schrempf
Journal:  J Bacteriol       Date:  1987-10       Impact factor: 3.490

2.  Genome characterization of glucose-isomerase-producingStreptomyces sp. NCIM 2730: detection of sequences homologous to a rice repeat sequence.

Authors:  M S Ghatge; V V Deshpande; P K Ranjekar
Journal:  World J Microbiol Biotechnol       Date:  1995-03       Impact factor: 3.312

3.  Extremely large chromosomal deletions are intimately involved in genetic instability and genomic rearrangements in Streptomyces glaucescens.

Authors:  A Birch; A Häusler; M Vögtli; W Krek; R Hütter
Journal:  Mol Gen Genet       Date:  1989-06

Review 4.  Genetics of Streptomyces rimosus, the oxytetracycline producer.

Authors:  Hrvoje Petković; John Cullum; Daslav Hranueli; Iain S Hunter; Natasa Perić-Concha; Jasenka Pigac; Arinthip Thamchaipenet; Dusica Vujaklija; Paul F Long
Journal:  Microbiol Mol Biol Rev       Date:  2006-09       Impact factor: 11.056

  4 in total

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