Literature DB >> 24414489

Genome characterization of glucose-isomerase-producingStreptomyces sp. NCIM 2730: detection of sequences homologous to a rice repeat sequence.

M S Ghatge1, V V Deshpande, P K Ranjekar.   

Abstract

Restriction analysis of the genomic DNA from a high glucose/xylose-isomerase-yieldingStreptomyces sp. NCIM 2730 revealed a number of distinct bands on a background smear, indicating the occurrence of repeated DNA sequences in the genome. Optical renaturation analysis indicated that 25% of the genome comprised rapidly reannealing sequences with a copy number of 50 and a kinetic complexity of 3×10(3). Hybridization of theStreptomyces genomic library with theStreptomyces DNA, supported the estimate of the repetitive DNA content derived from the re-association kinetics of the DNA. Hybridization of DNA from three differentStreptomyces species with a rice repetitive DNA probe revealed the presence of homologous sequences, which is a unique finding.

Entities:  

Year:  1995        PMID: 24414489     DOI: 10.1007/BF00704635

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  12 in total

1.  Estimate of the genome size by renaturation studies in Streptomyces.

Authors:  R Benigni; P A Petrov; A Carere
Journal:  Appl Microbiol       Date:  1975-08

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Determination of the base composition of deoxyribonucleic acid from its thermal denaturation temperature.

Authors:  J MARMUR; P DOTY
Journal:  J Mol Biol       Date:  1962-07       Impact factor: 5.469

4.  Streptomyces glucose/xylose isomerase has a single active site for glucose and xylose.

Authors:  S M Gaikwad; H S Pawar; H G Vartak; V V Deshpande
Journal:  Biochem Biophys Res Commun       Date:  1989-03-15       Impact factor: 3.575

5.  Heterogeneity of Streptomyces DNA.

Authors:  P P Antonov; I G Ivanov; G G Markov
Journal:  FEBS Lett       Date:  1977-07-01       Impact factor: 4.124

6.  Kinetics of renaturation of DNA.

Authors:  J G Wetmur; N Davidson
Journal:  J Mol Biol       Date:  1968-02-14       Impact factor: 5.469

7.  A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.

Authors:  A P Feinberg; B Vogelstein
Journal:  Anal Biochem       Date:  1983-07-01       Impact factor: 3.365

8.  Evidence for the wide distribution of repetitive DNA sequences in the genus Streptomyces.

Authors:  K Usdin; K Gertsch; R Kirby
Journal:  J Mol Evol       Date:  1984       Impact factor: 2.395

9.  Evidence for specific interaction of guanidine hydrochloride with carboxy groups of enzymes/proteins.

Authors:  M S Ghatge; V V Deshpande
Journal:  Biochem Biophys Res Commun       Date:  1993-06-30       Impact factor: 3.575

10.  Evidence for the essential histidine residue at the active site of glucose/xylose isomerase from Streptomyces.

Authors:  S M Gaikwad; M W More; H G Vartak; V V Deshpande
Journal:  Biochem Biophys Res Commun       Date:  1988-08-30       Impact factor: 3.575

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