Literature DB >> 6429143

Differentiation-dependent chromatin alterations precede and accompany transcription of immunoglobulin light chain genes.

S M Rose, W T Garrard.   

Abstract

We have studied the nature of chromatin alterations along immunoglobulin light chain (IgL) genes during B cell development using cultured murine cell lines. Employing a chromatin fractionation procedure on micrococcal nuclease-treated nuclei, we demonstrate that transcriptionally active k IgL chromatin lacks a canonical nucleosomal repeat and exhibits a pronounced association with insoluble nuclear material but is processed by nuclease to a soluble nucleosomal component that apparently lacks histone H1 and is enriched in high mobility group proteins. Of particular significance, utilizing a variant plasmacytoma cell line that has transcriptionally inactivated one k allele via a promoter deletion, we demonstrate that transcription per se is not responsible for these novel alterations. Furthermore, we show that the chromatin encompassing germline (unrearranged) and transcriptionally silent lambda IgL alleles in k-producing plasmacytomas exhibit some of the same unusual properties that are displayed by k alleles. Finally, we demonstrate that these alterations only occur in cell lines of the lymphocyte lineage that have progressed past the early pre-B cell stage; when inactive, both k and lambda IgL genes possess typical nucleosomal packaging and co-fractionate with histone H1-containing chromatin. These findings lead us to propose a model that predicts B cell stage-specific alterations in IgL chromatin prior to gene rearrangement and transcription.

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Year:  1984        PMID: 6429143

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  55 in total

1.  PTIP, a novel BRCT domain-containing protein interacts with Pax2 and is associated with active chromatin.

Authors:  M S Lechner; I Levitan; G R Dressler
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

2.  Global survey of chromatin accessibility using DNA microarrays.

Authors:  M Ryan Weil; Piotr Widlak; John D Minna; Harold R Garner
Journal:  Genome Res       Date:  2004-07       Impact factor: 9.043

3.  Nucleoprotein hybridization: a method for isolating active and inactive genes as chromatin.

Authors:  C Vincenz; J Fronk; G A Tank; J P Langmore
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

4.  The protamine-like DNA-binding protein P6.9 epigenetically up-regulates Autographa californica multiple nucleopolyhedrovirus gene transcription in the late infection phase.

Authors:  Ying Peng; Kun Li; Rong-juan Pei; Chun-chen Wu; Chang-yong Liang; Yun Wang; Xin-wen Chen
Journal:  Virol Sin       Date:  2012-01-22       Impact factor: 4.327

5.  Association of bovine papillomavirus E2 protein with nuclear structures in vivo.

Authors:  Reet Kurg; Kristiina Sild; Aigi Ilves; Mari Sepp; Mart Ustav
Journal:  J Virol       Date:  2005-08       Impact factor: 5.103

6.  Decondensing the protamine domain for transcription.

Authors:  Rui Pires Martins; Stephen A Krawetz
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-01       Impact factor: 11.205

7.  Low ionic strength extraction of nuclease-treated nuclei destroys the attachment of transcriptionally active DNA to the nuclear skeleton.

Authors:  S V Razin; O V Yarovaya; G P Georgiev
Journal:  Nucleic Acids Res       Date:  1985-10-25       Impact factor: 16.971

8.  Micrococcal nuclease digestion of nuclei reveals extended nucleosome ladders having anomalous DNA lengths for chromatin assembled on non-replicating plasmids in transfected cells.

Authors:  S Jeong; A Stein
Journal:  Nucleic Acids Res       Date:  1994-02-11       Impact factor: 16.971

9.  The effects of transcription on the nucleosome structure of four Dictyostelium genes.

Authors:  J Pavlovic; E Banz; R W Parish
Journal:  Nucleic Acids Res       Date:  1989-03-25       Impact factor: 16.971

10.  Functional complementation of human centromere protein A (CENP-A) by Cse4p from Saccharomyces cerevisiae.

Authors:  Gerhard Wieland; Sandra Orthaus; Sabine Ohndorf; Stephan Diekmann; Peter Hemmerich
Journal:  Mol Cell Biol       Date:  2004-08       Impact factor: 4.272

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