Literature DB >> 6394966

Leakiness of termination codons in mitochondrial mutants of the yeast Saccharomyces cerevisiae.

B Weiss-Brummer, A Hüttenhofer, F Kaudewitz.   

Abstract

Seven mutants in exon 1 of the mitochondrial cob gene in yeast are described with respect to their translation products, RNA pattern, and deoxyribonucleotide sequence alteration(s). Sequence analysis of the mutations, which previously were shown to cause premature termination of apocytochrome b, revealed that two of them directly transform sense codons to chain-termination codons, whereas the other four are frame-shift mutations (+1/-1, insertions/deletions). Only the latter mutants are found to be leaky in that (a) RNA splicing occurs, and (b) in three of them, to a minor degree an apocytochrome b homologue is synthesized, which, however, does not lead to respiratory competence. Both require translation through exon 1 into downstream introns to produce 'RNA maturases' necessary for splicing the primary transcript (Lazowska et al. 1980; Weiss-Brummer et al. 1982). These and other previously published data show that mitochondrial frame-shift mutants tend to be leaky to a variable degree. Several possible mechanisms of 'frame-shift suppression' are discussed.

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Year:  1984        PMID: 6394966     DOI: 10.1007/BF00328702

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  22 in total

1.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

2.  Tryptophan transfer RNA as the UGA suppressor.

Authors:  D Hirsh
Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

3.  Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.

Authors:  P S Thomas
Journal:  Proc Natl Acad Sci U S A       Date:  1980-09       Impact factor: 11.205

4.  Processing of yeast mitochondrial RNA: involvement of intramolecular hybrids in splicing of cob intron 4 RNA by mutation and reversion.

Authors:  B Weiss-Brummer; J Holl; R J Schweyen; G Rödel; F Kaudewitz
Journal:  Cell       Date:  1983-05       Impact factor: 41.582

5.  Single base substitution in an intron of oxidase gene compensates splicing defects of the cytochrome b gene.

Authors:  G Dujardin; C Jacq; P P Slonimski
Journal:  Nature       Date:  1982-08-12       Impact factor: 49.962

6.  Functional domains in introns: trans-acting and cis-acting regions of intron 4 of the cob gene.

Authors:  P Q Anziano; D K Hanson; H R Mahler; P S Perlman
Journal:  Cell       Date:  1982-10       Impact factor: 41.582

7.  Long range control circuits within mitochondria and between nucleus and mitochondria. II. Genetic and biochemical analyses of suppressors which selectively alleviate the mitochondrial intron mutations.

Authors:  O Groudinsky; G Dujardin; P P Slonimski
Journal:  Mol Gen Genet       Date:  1981

8.  Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange.

Authors:  G K McMaster; G G Carmichael
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

9.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

10.  Pathways of transcript splicing in yeast mitochondria. Mutations in intervening sequences of the split gene COB reveal a requirement for intervening sequence-encoded products.

Authors:  C Schmelzer; A Haid; G Grosch; R J Schweyen; F Kaudewitz
Journal:  J Biol Chem       Date:  1981-07-25       Impact factor: 5.157

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  13 in total

1.  tRNA anticodon replacement experiments show that ribosomal frameshifting can be caused by doublet decoding.

Authors:  A G Bruce; J F Atkins; R F Gesteland
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

2.  NAM9 nuclear suppressor of mitochondrial ochre mutations in Saccharomyces cerevisiae codes for a protein homologous to S4 ribosomal proteins from chloroplasts, bacteria, and eucaryotes.

Authors:  M Boguta; A Dmochowska; P Borsuk; K Wrobel; A Gargouri; J Lazowska; P P Slonimski; B Szczesniak; A Kruszewska
Journal:  Mol Cell Biol       Date:  1992-01       Impact factor: 4.272

3.  Substitution of an invariant nucleotide at the base of the highly conserved '530-loop' of 15S rRNA causes suppression of yeast mitochondrial ochre mutations.

Authors:  Z H Shen; T D Fox
Journal:  Nucleic Acids Res       Date:  1989-06-26       Impact factor: 16.971

4.  A mitochondrial frameshift-suppressor (+1) [corrected] of the yeast S. cerevisiae maps in the mitochondrial 15S rRNA locus.

Authors:  B Weiss-Brummer; H Sakai; F Kaudewitz
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

5.  A mitochondrial frameshift suppressor maps in the tRNASer-var1 region of the mitochondrial genome of the yeast S. cerevisiae.

Authors:  B Weiss-Brummer; H Sakai; A Hüttenhofer
Journal:  Curr Genet       Date:  1989-04       Impact factor: 3.886

6.  A controversy concerning the structure of the mitochondrial genome of a yeast petite mutant: resolution by sequence analysis.

Authors:  E Bergantino; G Carignani
Journal:  Curr Genet       Date:  1989-04       Impact factor: 3.886

7.  The yeast nuclear gene MRF1 encodes a mitochondrial peptide chain release factor and cures several mitochondrial RNA splicing defects.

Authors:  H J Pel; C Maat; M Rep; L A Grivell
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

8.  Missense exonic mitochondrial mutation in cytochrome b gene of Saccharomyces cerevisiae, resulting in core protein deficiency in complex III of the respiratory chain.

Authors:  P Chevillotte-Brivet; G Salou; D Meunier-Lemesle
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

9.  Biogenesis of mitochondria: DNA sequence analysis of mit- mutations in the mitochondrial oli2 gene coding for mitochondrial ATPase subunit 6 in Saccharomyces cerevisiae.

Authors:  U P John; T A Willson; A W Linnane; P Nagley
Journal:  Nucleic Acids Res       Date:  1986-09-25       Impact factor: 16.971

10.  The NAM2 proteins from S. cerevisiae and S. douglasii are mitochondrial leucyl-tRNA synthetases, and are involved in mRNA splicing.

Authors:  C J Herbert; M Labouesse; G Dujardin; P P Slonimski
Journal:  EMBO J       Date:  1988-02       Impact factor: 11.598

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