Literature DB >> 6378620

Correlation of exons with structural domains in alcohol dehydrogenase.

C I Brändén, H Eklund, C Cambillau, A J Pryor.   

Abstract

The intron/exon arrangement in the gene sequence of maize alcohol dehydrogenase has been compared to the three dimensional structure of liver alcohol dehydrogenase. The co-enzyme binding domain is separated from the catalytic domain by introns four and nine. Intron seven separates the co-enzyme binding domain into two structurally similar mononucleotide binding units. The first of these units is divided by introns five and six into three structurally similar alpha beta modules. Implications of these results for protein evolution is discussed. All splice junctions map close to or at the surface of the domains, and several of these cannot be identified by distance maps.

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Year:  1984        PMID: 6378620      PMCID: PMC557513          DOI: 10.1002/j.1460-2075.1984.tb01967.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  18 in total

1.  Structure of chicken muscle triose phosphate isomerase determined crystallographically at 2.5 angstrom resolution using amino acid sequence data.

Authors:  D W Banner; A C Bloomer; G A Petsko; D C Phillips; C I Pogson; I A Wilson; P H Corran; A J Furth; J D Milman; R E Offord; J D Priddle; S G Waley
Journal:  Nature       Date:  1975-06-19       Impact factor: 49.962

2.  Three-dimensional structure of horse liver alcohol dehydrogenase at 2-4 A resolution.

Authors:  H Eklund; B Nordström; E Zeppezauer; G Söderlund; I Ohlsson; T Boiwe; B O Söderberg; O Tapia; C I Brändén; A Akeson
Journal:  J Mol Biol       Date:  1976-03-25       Impact factor: 5.469

3.  Structure of liver alcohol dehydrogenase at 2.9-angstrom resolution.

Authors:  C I Brändén; H Eklund; B Nordström; T Boiwe; G Söderlund; E Zeppezauer; I Ohlsson; A Akeson
Journal:  Proc Natl Acad Sci U S A       Date:  1973-08       Impact factor: 11.205

4.  Chemical and biological evolution of nucleotide-binding protein.

Authors:  M G Rossmann; D Moras; K W Olsen
Journal:  Nature       Date:  1974-07-19       Impact factor: 49.962

5.  D-glyceraldehyde-3-phosphate dehydrogenase: three-dimensional structure and evolutionary significance.

Authors:  M Buehner; G C Ford; D Moras; K W Olsen; M G Rossman
Journal:  Proc Natl Acad Sci U S A       Date:  1973-11       Impact factor: 11.205

6.  Structural and functional similarities within the coenzyme binding domains of dehydrogenases.

Authors:  I Ohlsson; B Nordström; C I Brändén
Journal:  J Mol Biol       Date:  1974-10-25       Impact factor: 5.469

7.  Comparison of super-secondary structures in proteins.

Authors:  S T Rao; M G Rossmann
Journal:  J Mol Biol       Date:  1973-05-15       Impact factor: 5.469

8.  Structure of lactate dehydrogenase at 2-8 A resolution.

Authors:  M J Adams; G C Ford; R Koekoek; P J Lentz; A McPherson; M G Rossmann; I E Smiley; R W Schevitz; A J Wonacott
Journal:  Nature       Date:  1970-09-12       Impact factor: 49.962

9.  The interpretation of protein structures: estimation of static accessibility.

Authors:  B Lee; F M Richards
Journal:  J Mol Biol       Date:  1971-02-14       Impact factor: 5.469

10.  Exons--present from the beginning?

Authors:  C Blake
Journal:  Nature       Date:  1983 Dec 8-14       Impact factor: 49.962

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  26 in total

1.  Origin of a "bridge" intron in the gene for a two-domain globin.

Authors:  Y Naito; C K Riggs; T L Vandergon; A F Riggs
Journal:  Proc Natl Acad Sci U S A       Date:  1991-08-01       Impact factor: 11.205

2.  Speculations on the early course of evolution.

Authors:  J E Darnell; W F Doolittle
Journal:  Proc Natl Acad Sci U S A       Date:  1986-03       Impact factor: 11.205

3.  Molecular analysis of the alcohol dehydrogenase gene family of barley.

Authors:  M Trick; E S Dennis; K J Edwards; W J Peacock
Journal:  Plant Mol Biol       Date:  1988-03       Impact factor: 4.076

4.  Pea formaldehyde-active class III alcohol dehydrogenase: common derivation of the plant and animal forms but not of the corresponding ethanol-active forms (classes I and P).

Authors:  J Shafqat; M El-Ahmad; O Danielsson; M C Martínez; B Persson; X Parés; H Jornvall
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

5.  Do exons code for structural or functional units in proteins?

Authors:  T W Traut
Journal:  Proc Natl Acad Sci U S A       Date:  1988-05       Impact factor: 11.205

6.  Structure of the human phosphoglycerate kinase gene and the intron-mediated evolution and dispersal of the nucleotide-binding domain.

Authors:  A M Michelson; C C Blake; S T Evans; S H Orkin
Journal:  Proc Natl Acad Sci U S A       Date:  1985-10       Impact factor: 11.205

7.  Molecular analysis of the ADH1-Cm allele of maize.

Authors:  J C Osterman; E S Dennis
Journal:  Plant Mol Biol       Date:  1989-08       Impact factor: 4.076

8.  Isolation and biochemical analysis of ethyl methanesulfonate-induced alcohol dehydrogenase null mutants of arabidopsis thaliana (L.) Heynh.

Authors:  M Jacobs; R Dolferus; D Van den Bossche
Journal:  Biochem Genet       Date:  1988-02       Impact factor: 1.890

9.  The cloning and sequencing of the alcB gene, coding for alcohol dehydrogenase II, in Aspergillus nidulans.

Authors:  G D Hunter; I G Jones; H M Sealy-Lewis
Journal:  Curr Genet       Date:  1996-01       Impact factor: 3.886

10.  Mammalian alcohol dehydrogenases of separate classes: intermediates between different enzymes and intraclass isozymes.

Authors:  H Jörnvall; J O Höög; H von Bahr-Lindström; B L Vallee
Journal:  Proc Natl Acad Sci U S A       Date:  1987-05       Impact factor: 11.205

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