Literature DB >> 3362858

Do exons code for structural or functional units in proteins?

T W Traut1.   

Abstract

In considering the origin and evolution of proteins, the possibility that proteins evolved from exons coding for specific structure-function modules is attractive for its economy and simplicity but is not systematically supported by the available data. However, the number of correspondences between exons and units of protein structure-function that have so far been identified appears to be greater than expected by chance alone. The available data also show (i) that exons are fairly limited in size but are large enough to specify structure-function modules in proteins; (ii) that the position of introns for homologous domains in the same gene is reasonably stable, but there is also evidence for mechanisms that alter the position or existence of introns; and (iii) that it is possible that the observed relationship of exons to protein structure represents a degenerate state of an ancestral correspondence between exons and structure-function modules in proteins.

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Year:  1988        PMID: 3362858      PMCID: PMC280119          DOI: 10.1073/pnas.85.9.2944

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  120 in total

1.  Structure of a gene for the human epidermal 67-kDa keratin.

Authors:  L D Johnson; W W Idler; X M Zhou; D R Roop; P M Steinert
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

2.  Gene organization of the small subunit of human calcium-activated neutral protease.

Authors:  S Miyake; Y Emori; K Suzuki
Journal:  Nucleic Acids Res       Date:  1986-11-25       Impact factor: 16.971

3.  Intron-dependent evolution of the nucleotide-binding domains within alcohol dehydrogenase and related enzymes.

Authors:  G Duester; H Jörnvall; G W Hatfield
Journal:  Nucleic Acids Res       Date:  1986-03-11       Impact factor: 16.971

4.  Alternative transcription and two modes of splicing results in two myosin light chains from one gene.

Authors:  Y Nabeshima; Y Fujii-Kuriyama; M Muramatsu; K Ogata
Journal:  Nature       Date:  1984 Mar 22-28       Impact factor: 49.962

5.  Genetic and physical analysis of the chicken tk gene.

Authors:  G F Merrill; R M Harland; M Groudine; S L McKnight
Journal:  Mol Cell Biol       Date:  1984-09       Impact factor: 4.272

6.  The ovalbumin gene family: structure of the X gene and evolution of duplicated split genes.

Authors:  R Heilig; F Perrin; F Gannon; J L Mandel; P Chambon
Journal:  Cell       Date:  1980-07       Impact factor: 41.582

7.  Complete sequence of the chicken glyceraldehyde-3-phosphate dehydrogenase gene.

Authors:  E M Stone; K N Rothblum; M C Alevy; T M Kuo; R J Schwartz
Journal:  Proc Natl Acad Sci U S A       Date:  1985-03       Impact factor: 11.205

8.  Ovomucoid intervening sequences specify functional domains and generate protein polymorphism.

Authors:  J P Stein; J F Catterall; P Kristo; A R Means; B W O'Malley
Journal:  Cell       Date:  1980-10       Impact factor: 41.582

9.  O2 binding properties of the product of the central exon of beta-globin gene.

Authors:  C S Craik; S R Buchman; S Beychok
Journal:  Nature       Date:  1981-05-07       Impact factor: 49.962

10.  Human metallothionein genes--primary structure of the metallothionein-II gene and a related processed gene.

Authors:  M Karin; R I Richards
Journal:  Nature       Date:  1982-10-28       Impact factor: 49.962

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  37 in total

1.  Origins of genes: "big bang" or continuous creation?

Authors:  P K Keese; A Gibbs
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-15       Impact factor: 11.205

2.  Statistical analysis and prediction of the exonic structure of human genes.

Authors:  M S Gelfand
Journal:  J Mol Evol       Date:  1992-09       Impact factor: 2.395

3.  Computer prediction of the exon-intron structure of mammalian pre-mRNAs.

Authors:  M S Gelfand
Journal:  Nucleic Acids Res       Date:  1990-10-11       Impact factor: 16.971

4.  Exons encoding the highly conserved part of human glutaminyl-tRNA synthetase.

Authors:  E Kaiser; D Eberhard; R Knippers
Journal:  J Mol Evol       Date:  1992-01       Impact factor: 2.395

5.  Characterization of the human rod transducin alpha-subunit gene.

Authors:  S L Fong
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

6.  Locating protein-coding regions in human DNA sequences by a multiple sensor-neural network approach.

Authors:  E C Uberbacher; R J Mural
Journal:  Proc Natl Acad Sci U S A       Date:  1991-12-15       Impact factor: 11.205

7.  Selection of splice sites in pre-mRNAs with short internal exons.

Authors:  Z Dominski; R Kole
Journal:  Mol Cell Biol       Date:  1991-12       Impact factor: 4.272

8.  A relationship between GC content and coding-sequence length.

Authors:  J L Oliver; A Marín
Journal:  J Mol Evol       Date:  1996-09       Impact factor: 2.395

Review 9.  A survey on intron and exon lengths.

Authors:  J D Hawkins
Journal:  Nucleic Acids Res       Date:  1988-11-11       Impact factor: 16.971

10.  Functional swapping between transmembrane proteins TMEM16A and TMEM16F.

Authors:  Takayuki Suzuki; Jun Suzuki; Shigekazu Nagata
Journal:  J Biol Chem       Date:  2014-01-28       Impact factor: 5.157

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