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Literature DB >> 6369247

Evidence for a coding pattern on the non-coding strand of the E. coli genome.

Abstract

Analysis of codon usage frequency for the combined coding sequences of 52 E. coli genes, taken from the European Molecular Biology Laboratory Nucleotide Sequence Data Library, Release 2, shows that there is a significant positive correlation between the frequency with which a given codon appears on the coding strand and the frequency with which it appears, in phase, on the non-coding strand.

Entities: Species

Mesh：

Substances：
Bacterial Proteins
Codon

Year: 1984 PMID： 6369247 PMCID： PMC318658 DOI： 10.1093/nar/12.5.2235

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

37 in total

1. Nucleotide sequence of the ribosomal protein gene cluster adjacent to the gene for RNA polymerase subunit beta in Escherichia coli.

Authors: L E Post; G D Strycharz; M Nomura; H Lewis; P P Dennis
Journal: Proc Natl Acad Sci U S A Date: 1979-04 Impact factor: 11.205

2. DNA sequence of the gene for the outer membrane lipoprotein of E. coli: an extremely AT-rich promoter.

Authors: K Nakamura; M Inouye
Journal: Cell Date: 1979-12 Impact factor: 41.582

3. The genetic code and error transmission.

Authors: C Alff-Steinberger
Journal: Proc Natl Acad Sci U S A Date: 1969-10 Impact factor: 11.205

4. Sequence of the lactose permease gene.

Authors: D E Büchel; B Gronenborn; B Müller-Hill
Journal: Nature Date: 1980-02-07 Impact factor: 49.962

5. Organization of the recA gene of Escherichia coli.

Authors: T Horii; T Ogawa; H Ogawa
Journal: Proc Natl Acad Sci U S A Date: 1980-01 Impact factor: 11.205

6. DNA sequences from the str operon of Escherichia coli.

Authors: L E Post; M Nomura
Journal: J Biol Chem Date: 1980-05-25 Impact factor: 5.157

7. Regulation of the threonine operon: tandem threonine and isoleucine codons in the control region and translational control of transcription termination.

Authors: J F Gardner
Journal: Proc Natl Acad Sci U S A Date: 1979-04 Impact factor: 11.205

8. Sequence of the lacI gene.

Authors: P J Farabaugh
Journal: Nature Date: 1978-08-24 Impact factor: 49.962

9. Nucleotide sequence of the leader region of the phenylalanine operon of Escherichia coli.

Authors: G Zurawski; K Brown; D Killingly; C Yanofsky
Journal: Proc Natl Acad Sci U S A Date: 1978-09 Impact factor: 11.205

10. Nucleotide sequence of small ColE1 derivatives: structure of the regions essential for autonomous replication and colicin E1 immunity.

Authors: A Oka; N Nomura; M Morita; H Sugisaki; K Sugimoto; M Takanami
Journal: Mol Gen Genet Date: 1979-05-04

26 in total

1. Suppression of a frameshift mutation in the recE gene of Escherichia coli K-12 occurs by gene fusion.

Authors: C C Chu; A Templin; A J Clark
Journal: J Bacteriol Date: 1989-04 Impact factor: 3.490

2. Nucleotide sequence and characterization of the gene for secreted alkaline phosphatase from Lysobacter enzymogenes.

Authors: S Au; K L Roy; R G von Tigerstrom
Journal: J Bacteriol Date: 1991-08 Impact factor: 3.490

3. Sequencing and expression of the Butyrivibrio fibrisolvens xylB gene encoding a novel bifunctional protein with beta-D-xylosidase and alpha-L-arabinofuranosidase activities.

Authors: E A Utt; C K Eddy; K F Keshav; L O Ingram
Journal: Appl Environ Microbiol Date: 1991-04 Impact factor: 4.792

4. On concerted origin of transfer RNAs with complementary anticodons.

Authors: S Rodin; S Ohno; A Rodin
Journal: Orig Life Evol Biosph Date: 1993-12 Impact factor: 1.950

5. Nucleotide sequence and organization of Bacillus subtilis RNA polymerase major sigma (sigma 43) operon.

Authors: L F Wang; R H Doi
Journal: Nucleic Acids Res Date: 1986-05-27 Impact factor: 16.971

Review 6. Revised genetic linkage map of Bacillus subtilis.

Authors: P J Piggot; J A Hoch
Journal: Microbiol Rev Date: 1985-06

7. Genetic transformation in Streptococcus pneumoniae: nucleotide sequence and predicted amino acid sequence of recP.

Authors: B A Radnis; D K Rhee; D A Morrison
Journal: J Bacteriol Date: 1990-07 Impact factor: 3.490

8. Cloning, sequencing, and characterization of the principal acid phosphatase, the phoC+ product, from Zymomonas mobilis.

Authors: J L Pond; C K Eddy; K F Mackenzie; T Conway; D J Borecky; L O Ingram
Journal: J Bacteriol Date: 1989-02 Impact factor: 3.490

9. Transcription attenuation in Salmonella typhimurium: the significance of rare leucine codons in the leu leader.

Authors: P W Carter; J M Bartkus; J M Calvo
Journal: Proc Natl Acad Sci U S A Date: 1986-11 Impact factor: 11.205

10. Murein-metabolizing enzymes from Escherichia coli: sequence analysis and controlled overexpression of the slt gene, which encodes the soluble lytic transglycosylase.

Authors: H Engel; B Kazemier; W Keck
Journal: J Bacteriol Date: 1991-11 Impact factor: 3.490