Literature DB >> 6353160

The frequency of transcriptional and translational errors at nonsense codons in the lacZ gene of Escherichia coli.

R F Rosenberger, J Hilton.   

Abstract

Nonsense alleles in the lacZ gene of E. coli do not completely eliminate enzyme activity as errors during protein synthesis allow some chains to be completed. The relative contributions of transcriptional and translational errors to this leakiness were investigated by two methods: the introduction of rho- alleles into extreme-polar mutants and the kinetics of beta-galactosidase induction. Virtually all the errors appeared to be transcriptional in the case of two extreme-polar and one non-polar mutation. These alleles should prove useful for further in vivo investigations of RNA polymerase accuracy. With two other non-polar alleles, transcriptional mistakes were low and translational ones high. The frequency of RNA polymerase errors was context-dependent and varied for different nonsense codons in the same position and for the same codon in different positions. The reasons why some alleles showed no activity due to translational errors could not be clearly established. However, increasing the rates of ribosomal errors from one such allele with streptomycin raised the contribution of ribosomal errors to activity markedly and non-linearly. Translational mistakes may give rise to active enzyme only if the monomers are formed at a rate sufficient for effective aggregation to the normal tetramer.

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Year:  1983        PMID: 6353160     DOI: 10.1007/bf00334815

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  28 in total

1.  Effect of different mutations in ribosomal protein S5 of Escherichia coli on translational fidelity.

Authors:  W Piepersberg; A Böck; H G Wittmann
Journal:  Mol Gen Genet       Date:  1975-09-29

2.  A SPECTROPHOTOMETRIC ASSAY FOR THIOGALACTOSIDE TRANSACETYLASE.

Authors:  D H ALPERS; S H APPEL; G M TOMKINS
Journal:  J Biol Chem       Date:  1965-01       Impact factor: 5.157

3.  Mutants of Escherichia coli requiring methionine or vitamin B12.

Authors:  B D DAVIS; E S MINGIOLI
Journal:  J Bacteriol       Date:  1950-07       Impact factor: 3.490

4.  Amino acid sequence of beta-galactosidase. XI. Peptide ordering procedures and the complete sequence.

Authors:  A V Fowler; I Zabin
Journal:  J Biol Chem       Date:  1978-08-10       Impact factor: 5.157

5.  The suppression of defective translation by ppGpp and its role in the stringent response.

Authors:  P H O'Farrell
Journal:  Cell       Date:  1978-07       Impact factor: 41.582

6.  Error propagation in viable cells.

Authors:  J Gallant; L Palmer
Journal:  Mech Ageing Dev       Date:  1979-04       Impact factor: 5.432

7.  Ribosomal discrimination of tRNAs.

Authors:  L Gorini
Journal:  Nat New Biol       Date:  1971-12-29

8.  Bacterial ribosomes with two ambiguity mutations: effects of translational fidelity, on the response to aminoglycosides and on the rate of protein synthesis.

Authors:  W Piepersberg; V Noseda; A Böck
Journal:  Mol Gen Genet       Date:  1979-03-09

9.  Use of gene fusions to determine a partial signal sequence of alkaline phosphatase.

Authors:  A Sarthy; A Fowler; I Zabin; J Beckwith
Journal:  J Bacteriol       Date:  1979-09       Impact factor: 3.490

10.  Codon-specific missense errors in vivo.

Authors:  F Bouadloun; D Donner; C G Kurland
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  29 in total

Review 1.  Editing of errors in selection of amino acids for protein synthesis.

Authors:  H Jakubowski; E Goldman
Journal:  Microbiol Rev       Date:  1992-09

2.  Visualizing high error levels during gene expression in living bacterial cells.

Authors:  Mor Meyerovich; Gideon Mamou; Sigal Ben-Yehuda
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-07       Impact factor: 11.205

3.  Transient mutators: a semiquantitative analysis of the influence of translation and transcription errors on mutation rates.

Authors:  J Ninio
Journal:  Genetics       Date:  1991-11       Impact factor: 4.562

4.  Potential role of phenotypic mutations in the evolution of protein expression and stability.

Authors:  Moshe Goldsmith; Dan S Tawfik
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-01       Impact factor: 11.205

5.  Large-scale detection of in vivo transcription errors.

Authors:  Jean-François Gout; W Kelley Thomas; Zachary Smith; Kazufusa Okamoto; Michael Lynch
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-28       Impact factor: 11.205

6.  Nucleic acid composition, codon usage, and the rate of synonymous substitution in protein-coding genes.

Authors:  A Ticher; D Graur
Journal:  J Mol Evol       Date:  1989-04       Impact factor: 2.395

Review 7.  Errors and alternatives in reading the universal genetic code.

Authors:  J Parker
Journal:  Microbiol Rev       Date:  1989-09

8.  Use of an in vivo reporter assay to test for transcriptional and translational fidelity in yeast.

Authors:  Randal J Shaw; Nicholas D Bonawitz; Daniel Reines
Journal:  J Biol Chem       Date:  2002-05-02       Impact factor: 5.157

9.  Flipping of the ribosomal A-site adenines provides a basis for tRNA selection.

Authors:  Xiancheng Zeng; Jeetender Chugh; Anette Casiano-Negroni; Hashim M Al-Hashimi; Charles L Brooks
Journal:  J Mol Biol       Date:  2014-05-09       Impact factor: 5.469

10.  Universally high transcript error rates in bacteria.

Authors:  Weiyi Li; Michael Lynch
Journal:  Elife       Date:  2020-05-29       Impact factor: 8.140

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