Literature DB >> 6324118

In vitro generation of specific deletions in DNA cloned in M13 vectors using synthetic oligodeoxyribonucleotides: mutants in the 5'-flanking region of the yeast alcohol dehydrogenase II gene.

V L Chan, M Smith.   

Abstract

Deletion mutants are particularly useful in defining the boundaries of noncoding genetic functions. Such mutants can be precisely generated using synthetic oligodeoxyribonucleotides as mutagens. In this paper we describe the application of this method to recombinant DNA cloned in a phage M13-derived vector. The mutagenic oligodeoxyribonucleotides, 20 and 21 nucleotides in length, were used to delete a tract of 20 dA-dT base-pairs and an adjacent 22 base-pair perfect dyad from the ADR3 locus, the 5'-flanking regulatory region of the ADR2 gene, of Saccharomyces cerevisiae with high efficiency.

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Year:  1984        PMID: 6324118      PMCID: PMC318671          DOI: 10.1093/nar/12.5.2407

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  17 in total

1.  Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing.

Authors:  F Sanger; A R Coulson; B G Barrell; A J Smith; B A Roe
Journal:  J Mol Biol       Date:  1980-10-25       Impact factor: 5.469

2.  Transposable elements associated with constitutive expression of yeast alcohol dehydrogenase II.

Authors:  V M Williamson; E T Young; M Ciriacy
Journal:  Cell       Date:  1981-02       Impact factor: 41.582

3.  Use of E. coli polynucleotide phosphorylase for the synthesis of oligodeoxyribonucleotides of defined sequence.

Authors:  S Gillam; M Smith
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

4.  The nucleotide sequence of the HIS4 region of yeast.

Authors:  T F Donahue; P J Farabaugh; G R Fink
Journal:  Gene       Date:  1982-04       Impact factor: 3.688

5.  A system for shotgun DNA sequencing.

Authors:  J Messing; R Crea; P H Seeburg
Journal:  Nucleic Acids Res       Date:  1981-01-24       Impact factor: 16.971

6.  Cis-dominant regulatory mutations affecting the formation of glucose-repressible alcohol dehydrogenase (ADHII) in Saccharomyces cerevisiae.

Authors:  M Ciriacy
Journal:  Mol Gen Genet       Date:  1976-06-15

7.  Isolation and characterization of further cis- and trans-acting regulatory elements involved in the synthesis of glucose-repressible alcohol dehydrogenase (ADHII) in Saccharomyces cerevisiae.

Authors:  M Ciriacy
Journal:  Mol Gen Genet       Date:  1979-11

8.  Yeast gene TRP5: structure, function, regulation.

Authors:  H Zalkin; C Yanofsky
Journal:  J Biol Chem       Date:  1982-02-10       Impact factor: 5.157

9.  Directed deletion of a yeast transfer RNA intervening sequence.

Authors:  R B Wallace; P F Johnson; S Tanaka; M Schöld; K Itakura; J Abelson
Journal:  Science       Date:  1980-09-19       Impact factor: 47.728

10.  Site-specific mutagenesis using oligodeoxyribonucleotides: isolation of a phenotypically silent phi X174 mutant, with a specific nucleotide deletion, at very high efficiency.

Authors:  S Gillam; C R Astell; M Smith
Journal:  Gene       Date:  1980-12       Impact factor: 3.688

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  7 in total

1.  A method for introducing random single point deletions in specific DNA target sequences using oligonucleotides.

Authors:  S S Ner; T C Atkinson; M Smith
Journal:  Nucleic Acids Res       Date:  1989-06-12       Impact factor: 16.971

2.  EcoK selection vectors for shotgun cloning into M13 and deletion mutagenesis.

Authors:  M M Waye; M E Verhoeyen; P T Jones; G Winter
Journal:  Nucleic Acids Res       Date:  1985-12-09       Impact factor: 16.971

3.  Initiation complex formation on Euglena chloroplast 30S subunits in the presence of natural mRNAs.

Authors:  C C Wang; W B Roney; R L Alston; L L Spremulli
Journal:  Nucleic Acids Res       Date:  1989-12-11       Impact factor: 16.971

4.  Conservation of histone H2A/H2B intergene regions: a role for the H2B specific element in divergent transcription.

Authors:  R A Sturm; S Dalton; J R Wells
Journal:  Nucleic Acids Res       Date:  1988-09-12       Impact factor: 16.971

5.  ADR1-mediated regulation of ADH2 requires an inverted repeat sequence.

Authors:  J Shuster; J Yu; D Cox; R V Chan; M Smith; E Young
Journal:  Mol Cell Biol       Date:  1986-06       Impact factor: 4.272

Review 6.  Site-directed mutagenesis.

Authors:  P Carter
Journal:  Biochem J       Date:  1986-07-01       Impact factor: 3.857

7.  Deletion analysis identifies a region, upstream of the ADH2 gene of Saccharomyces cerevisiae, which is required for ADR1-mediated derepression.

Authors:  D R Beier; A Sledziewski; E T Young
Journal:  Mol Cell Biol       Date:  1985-07       Impact factor: 4.272

  7 in total

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