Literature DB >> 6320117

Transcription in vivo of an Alu family member upstream from the human epsilon-globin gene.

M Allan, J Paul.   

Abstract

The more distal Alu repeat flanking the epsilon-globin gene is transcribed in K562 cells to generate transcripts 350-400 nucleotides in length. Initiation occurs at the start of the repeat, upstream of a putative PolIII control signal. These transcripts originate from the strand which does not code epsilon-globin and are oriented in the opposite direction from the gene. They are non-polyadenylated, nucleus-confined and are only detectable in association with expression of the epsilon-globin gene.

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Year:  1984        PMID: 6320117      PMCID: PMC318565          DOI: 10.1093/nar/12.2.1193

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  22 in total

1.  RNA polymerase III transcriptional units are interspersed among human non-alpha-globin genes.

Authors:  C Duncan; P A Biro; P V Choudary; J T Elder; R R Wang; B G Forget; J K de Riel; S M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

2.  Molecular cloning and characterization of the human beta-like globin gene cluster.

Authors:  E F Fritsch; R M Lawn; T Maniatis
Journal:  Cell       Date:  1980-04       Impact factor: 41.582

3.  An abundant cytoplasmic 7S RNA is complementary to the dominant interspersed middle repetitive DNA sequence family in the human genome.

Authors:  A M Weiner
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

4.  A ubiquitous family of repeated DNA sequences in the human genome.

Authors:  C M Houck; F P Rinehart; C W Schmid
Journal:  J Mol Biol       Date:  1979-08-15       Impact factor: 5.469

5.  The 5' flanking region of human epsilon-globin gene.

Authors:  F E Baralle; C C Shoulders; S Goodbourn; A Jeffreys; N J Proudfoot
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

6.  Partial nucleotide sequence of the 300-nucleotide interspersed repeated human DNA sequences.

Authors:  C M Rubin; C M Houck; P L Deininger; T Friedmann; C W Schmid
Journal:  Nature       Date:  1980-03-27       Impact factor: 49.962

7.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

8.  Specific labeling of 3' termini with T4 DNA polymerase.

Authors:  M D Challberg; P T Englund
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

9.  Ubiquitous, interspersed repeated sequences in mammalian genomes.

Authors:  W R Jelinek; T P Toomey; L Leinwand; C H Duncan; P A Biro; P V Choudary; S M Weissman; C M Rubin; C M Houck; P L Deininger; C W Schmid
Journal:  Proc Natl Acad Sci U S A       Date:  1980-03       Impact factor: 11.205

10.  Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease.

Authors:  J M Chirgwin; A E Przybyla; R J MacDonald; W J Rutter
Journal:  Biochemistry       Date:  1979-11-27       Impact factor: 3.162

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  23 in total

1.  K562 cells implicate increased chromatin accessibility in Alu transcriptional activation.

Authors:  T H Li; C Kim; C M Rubin; C W Schmid
Journal:  Nucleic Acids Res       Date:  2000-08-15       Impact factor: 16.971

2.  Interaction of epsilon-globin cis-acting control elements with erythroid-specific regulatory macromolecules.

Authors:  J Wu; G J Grindlay; C Johnson; M Allan
Journal:  Proc Natl Acad Sci U S A       Date:  1990-10       Impact factor: 11.205

3.  The chicken alpha-globin gene domain is transcribed into a 17-kilobase polycistronic RNA.

Authors:  F Broders; A Zahraoui; K Scherrer
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

4.  Negative regulation of the human epsilon-globin gene by transcriptional interference: role of an Alu repetitive element.

Authors:  J Wu; G J Grindlay; P Bushel; L Mendelsohn; M Allan
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

5.  Correlation between patterns of DNase I-hypersensitive sites and upstream promoter activity of the human epsilon-globin gene at different stages of erythroid development.

Authors:  P Bushel; K Rego; L Mendelsohn; M Allan
Journal:  Mol Cell Biol       Date:  1990-03       Impact factor: 4.272

Review 6.  Reverse transcriptase: mediator of genomic plasticity.

Authors:  J Brosius; H Tiedge
Journal:  Virus Genes       Date:  1995       Impact factor: 2.332

7.  Conservation and variation in the large scale organisation of the globin gene domains of duck and chicken.

Authors:  A Kretsovali; L Marcaud; J Moreau; K Scherrer
Journal:  Mol Gen Genet       Date:  1986-05

8.  In vivo transcription of a cloned prosimian primate SINE sequence.

Authors:  V K Slagel; P L Deininger
Journal:  Nucleic Acids Res       Date:  1989-11-11       Impact factor: 16.971

9.  Gene for lysine tRNA1 may be a progenitor of the highly repetitive and transcribable sequences present in the salmon genome.

Authors:  K Matsumoto; K Murakami; N Okada
Journal:  Proc Natl Acad Sci U S A       Date:  1986-05       Impact factor: 11.205

10.  Changes in minor transcripts from the alpha 1 and beta maj globin and glutathione peroxidase genes during erythropoiesis.

Authors:  J Frampton; D Conkie; I Chambers; W McBain; M Dexter; P Harrison
Journal:  Nucleic Acids Res       Date:  1987-05-11       Impact factor: 16.971

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