Literature DB >> 3016478

Conservation and variation in the large scale organisation of the globin gene domains of duck and chicken.

A Kretsovali, L Marcaud, J Moreau, K Scherrer.   

Abstract

The genomic DNA of cloned recombinants containing the duck globin genes was compared to that of the analogous domains of the chicken. A 36 kb insert including the three alpha-type globin genes was isolated from a newly prepared duck genomic library in the cosmid PJB8; another recombinant contained a 45 kb insert with the four beta globin genes. In the alpha globin gene domain, the relative positions of genes, of repetitive sequences, and of the A + T-rich segments (AT-rich linkers, ATRLs) which frame the gene cluster (Moreau et al. 1982), were found to be closely maintained between duck and chicken. Although ATRLs and repetitive sequences also frame the gene cluster in the beta globin domains of duck and chicken, there is more genetic drift in their relative positions than in the alpha domain. It is of interest that several repetitive DNA segments were detected in the chicken beta globin domain which do not exist in corresponding positions in the duck. In view of the strict conservation in both species of genes and their relative positions in the cluster, this observation seems to exclude a simple function of repetitive sequences in the control of individual genes. The data are discussed with regard to the possible significance of repetitive and AT-rich DNA segments in genome organisation and function.

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Year:  1986        PMID: 3016478     DOI: 10.1007/bf00333954

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  65 in total

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Authors:  R J Britten; E H Davidson
Journal:  Science       Date:  1969-07-25       Impact factor: 47.728

4.  Molecular cloning and characterization of the human beta-like globin gene cluster.

Authors:  E F Fritsch; R M Lawn; T Maniatis
Journal:  Cell       Date:  1980-04       Impact factor: 41.582

5.  Rapid and efficient cosmid cloning.

Authors:  D Ish-Horowicz; J F Burke
Journal:  Nucleic Acids Res       Date:  1981-07-10       Impact factor: 16.971

6.  The isolation and partial characterization of linked alpha A- and alpha D-globin genes from a duck DNA recombinant library.

Authors:  J Niessing; C Erbil; V Neubauer
Journal:  Gene       Date:  1982-05       Impact factor: 3.688

7.  Transcription in vivo of an Alu family member upstream from the human epsilon-globin gene.

Authors:  M Allan; J Paul
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971

8.  Analysis of the adult chicken beta-globin gene. Nucleotide sequence of the locus, microheterogeneity at the 5'-end of beta-globin mRNA, and aberrant nuclear RNA species.

Authors:  M Dolan; J B Dodgson; J D Engel
Journal:  J Biol Chem       Date:  1983-03-25       Impact factor: 5.157

9.  Synthesis in vitro of an exceptionally long RNA transcript promoted by an AluI sequence.

Authors:  J L Manley; M T Colozzo
Journal:  Nature       Date:  1982-11-25       Impact factor: 49.962

10.  The primary structure of the duck alpha D-globin gene: an unusual 5' splice junction sequence.

Authors:  C Erbil; J Niessing
Journal:  EMBO J       Date:  1983       Impact factor: 11.598

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  8 in total

1.  Nuclear matrix attachment occurs in several regions of the IgH locus.

Authors:  P N Cockerill
Journal:  Nucleic Acids Res       Date:  1990-05-11       Impact factor: 16.971

2.  Transcription of the alpha globin gene domain in normal and AEV-transformed chicken erythroblasts: mapping of giant globin-specific RNA including embryonic and adult genes.

Authors:  F Broders; K Scherrer
Journal:  Mol Gen Genet       Date:  1987-09

3.  The chicken alpha-globin gene domain is transcribed into a 17-kilobase polycistronic RNA.

Authors:  F Broders; A Zahraoui; K Scherrer
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

4.  Mapping of structural and transcription-related matrix attachment sites in the alpha-globin gene domain of avian erythroblasts and erythrocytes.

Authors:  G Farache; S V Razin; J Rzeszowska-Wolny; J Moreau; F R Targa; K Scherrer
Journal:  Mol Cell Biol       Date:  1990-10       Impact factor: 4.272

5.  Organization of the 3'-boundary of the chicken alpha globin gene domain and characterization of a CR 1-specific protein binding site.

Authors:  G Farache; S V Razin; F R Targa; K Scherrer
Journal:  Nucleic Acids Res       Date:  1990-02-11       Impact factor: 16.971

6.  Correlations of repetitive and AT-rich DNA segments within the chicken globin gene domains.

Authors:  F Broders; S Razin; G Farache; J Moreau; K Scherrer
Journal:  Mol Biol Rep       Date:  1986       Impact factor: 2.316

7.  A hotspot for novel amplification joints in a mosaic of Alu-like repeats and palindromic A + T-rich DNA.

Authors:  O Hyrien; M Debatisse; G Buttin; B R de Saint Vincent
Journal:  EMBO J       Date:  1987-08       Impact factor: 11.598

8.  Promoter, enhancer and silencer elements regulate rearrangement of an immunoglobulin transgene.

Authors:  R Lauster; C A Reynaud; I L Mårtensson; A Peter; D Bucchini; J Jami; J C Weill
Journal:  EMBO J       Date:  1993-12       Impact factor: 11.598

  8 in total

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