Literature DB >> 6300775

Nucleotide sequence of the transcriptional initiation region of Dictyostelium discoideum rRNA gene and comparison of the initiation regions of three lower eukaryotes' genes.

Y Hoshikawa, Y Iida, M Iwabuchi.   

Abstract

The 5' end of the rRNA precursor of D. discoideum was mapped on a cloned rDNA by S1 nuclease protection mapping, and the sequence of about 1240 nucleotides surrounding the transcriptional initiation site of the rRNA gene has been determined. Repeated sequences consisting of 16 nucleotides appeared in the region upstream from the initiation point. Comparison of the nucleotide sequences around the initiation site of rRNA genes in three lower eukaryotes, D. discoideum, Saccharomyces cerevisiae and Tetrahymena pyriformis, indicated that there was little similarity in the nontranscribed spacer regions, but in the transcribed spacer regions near the initiation point, very similar sequences consisting of 9 nucleotides were found.

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Year:  1983        PMID： 6300775      PMCID： PMC325831          DOI： 10.1093/nar/11.6.1725

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  24 in total

1.  Triphosphate residues at the 5' ends of rRNA precursor and 5S RNA from Dictyostelium discoideum.

Authors:  B Batts-Young; H F Lodish
Journal:  Proc Natl Acad Sci U S A       Date:  1978-02       Impact factor: 11.205

2.  Evidence for two alpha-amanitin-resistant RNA polymerases in vegetative amoebae of Dictyostelium discoideum.

Authors:  T Yagura; M Yanagisawa; M Iwabuchi
Journal:  Biochem Biophys Res Commun       Date:  1976-01-12       Impact factor: 3.575

3.  Sizing and mapping of early adenovirus mRNAs by gel electrophoresis of S1 endonuclease-digested hybrids.

Authors:  A J Berk; P A Sharp
Journal:  Cell       Date:  1977-11       Impact factor: 41.582

4.  A new method for sequencing DNA.

Authors:  A M Maxam; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1977-02       Impact factor: 11.205

5.  Organization of the ribosomal RNA genes of Dictyostelium discoideum. Mapping of the transcribed region.

Authors:  G Frankel; A F Cockburn; K L Kindle; R A Firtel
Journal:  J Mol Biol       Date:  1977-02-05       Impact factor: 5.469

6.  Synthesis of precursor molecules of ribosomal RNA in the cellular slime mold Dictyostelium discoideum.

Authors:  M Iwabuchi; Y Mizukami; M Sameshima
Journal:  Biochim Biophys Acta       Date:  1971-02-11

7.  Organization of the ribosomal RNA genes of Dictyostelium discoideum: mapping of the nontranscribed spacer regions.

Authors:  A F Cockburn; M J Newkirk; R A Firtel
Journal:  Cell       Date:  1976-12       Impact factor: 41.582

8.  Analysis of restriction fragments of T7 DNA and determination of molecular weights by electrophoresis in neutral and alkaline gels.

Authors:  M W McDonell; M N Simon; F W Studier
Journal:  J Mol Biol       Date:  1977-02-15       Impact factor: 5.469

9.  A simple method for DNA restriction site mapping.

Authors:  H O Smith; M L Birnstiel
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

10.  Precursors of ribosomal RNA in the cellular slime mold Dictyostelium discoideum. Isolation and characterization.

Authors:  B Batts-Young; N Maizels; H F Lodish
Journal:  J Biol Chem       Date:  1977-06-10       Impact factor: 5.157
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  11 in total

1.  Molecular organization of the 5S rDNA gene type II in elasmobranchs.

Authors:  Sergio I Castro; Jose S Hleap; Heiber Cárdenas; Christian Blouin
Journal:  RNA Biol       Date:  2015-10-21       Impact factor: 4.652

2.  Sequence and generation of mature ribosomal RNA transcripts in Dictyostelium discoideum.

Authors:  Carsten Boesler; Janis Kruse; Fredrik Söderbom; Christian Hammann
Journal:  J Biol Chem       Date:  2011-03-18       Impact factor: 5.157

3.  Sequence organization and gene expression of pGD1, a plasmid found in a wild isolate of Dictyostelium.

Authors:  H Orii; Y Tanaka; K Yanagisawa
Journal:  Nucleic Acids Res       Date:  1989-02-25       Impact factor: 16.971

4.  Organization of the ribosomal RNA genes of Schizophyllum commune.

Authors:  B Buckner; C P Novotny; R C Ullrich
Journal:  Curr Genet       Date:  1988-05       Impact factor: 3.886

5.  Structure of the Bombyx mori rDNA: initiation site for its transcription.

Authors:  H Fujiwara; H Ishikawa
Journal:  Nucleic Acids Res       Date:  1987-02-11       Impact factor: 16.971

6.  Nucleotide sequence of a complete ribosomal spacer of D. melanogaster.

Authors:  A Simeone; A La Volpe; E Boncinelli
Journal:  Nucleic Acids Res       Date:  1985-02-25       Impact factor: 16.971

7.  Nucleotide sequence of the 5'-terminal coding region for pre-rRNA and mature 17S rRNA in Tetrahymena thermophila rDNA.

Authors:  J Engberg; N Din; H Saiga; T Higashinakagawa
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971

8.  Localization and DNA sequence around the initiation site of ribosomal RNA transcription in Physarum polycephalum.

Authors:  B Blum; T Seebeck; R Braun; P Ferris; V Vogt
Journal:  Nucleic Acids Res       Date:  1983-12-10       Impact factor: 16.971

9.  Sequence analysis of the transcribed and 5' non-transcribed regions of the ribosomal RNA gene in Dictyostelium discoideum.

Authors:  T Ozaki; Y Hoshikawa; Y Iida; M Iwabuchi
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

10.  A conserved sequence element is present around the transcription initiation site for RNA polymerase A in Saccharomycetoideae.

Authors:  M P Verbeet; J Klootwijk; H van Heerikhuizen; R D Fontijn; E Vreugdenhil; R J Planta
Journal:  Nucleic Acids Res       Date:  1984-01-25       Impact factor: 16.971
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