Literature DB >> 6294603

A rat tRNA gene cluster containing the genes for tRNAPro and tRNALys. Analysis of nucleotide sequences of the genes and the surrounding regions.

T Sekiya, R Nishizawa, K Matsuda, Y Taya, S Nishimura.   

Abstract

A lambda clone carrying a rat DNA fragment of 11.9 kb was isolated from a rat gene library with total rat tRNA as a probe. Nucleotide sequence analysis revealed that the DNA fragment contained six tRNA genes, three for tRNAPro and three for tRNALys. Of the six genes all but one tRNAPro gene have the same polarity. Each tRNA gene is separated by a DNA region of 0.1 to 3.6 kb. The 5'-flanking regions of the six rat genes in the cluster do not have any significant sequence homology, but in the 3'-flanking region, each gene has a short T cluster, which is supposed to be a transcription termination signal.

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Year:  1982        PMID： 6294603      PMCID： PMC326931          DOI： 10.1093/nar/10.20.6411

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  20 in total

1.  The primer tRNA for Moloney murine leukemia virus DNA synthesis. Nucleotide sequence and aminoacylation of tRNAPro.

Authors:  F Harada; G G Peters; J E Dahlberg
Journal:  J Biol Chem       Date:  1979-11-10       Impact factor: 5.157

2.  The rat serum albumin gene: analysis of cloned sequences.

Authors:  T D Sargent; J R Wu; J M Sala-Trepat; R B Wallace; A A Reyes; J Bonner
Journal:  Proc Natl Acad Sci U S A       Date:  1979-07       Impact factor: 11.205

3.  A tRNA gene of Xenopus laevis contains at least two sites promoting transcription.

Authors:  A Kressmann; H Hofstetter; E Di Capua; R Grosschedl; M L Birnstiel
Journal:  Nucleic Acids Res       Date:  1979-12-11       Impact factor: 16.971

4.  Evolution of a D. melanogaster glutamate tRNA gene cluster.

Authors:  H A Hosbach; M Silberklang; B J McCarthy
Journal:  Cell       Date:  1980-08       Impact factor: 41.582

5.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

6.  A split promoter for a eucaryotic tRNA gene.

Authors:  H Hofstetter; A Kressman; M L Birnstiel
Journal:  Cell       Date:  1981-05       Impact factor: 41.582

7.  Nucleotide sequence of three isoaccepting lysine tRNAs from rabbit liver and SV40-transformed mouse fibroblasts.

Authors:  M Raba; K Limburg; M Burghagen; J R Katze; M Simsek; J E Heckman; U L Rajbhandary; H J Gross
Journal:  Eur J Biochem       Date:  1979-06

8.  The gross anatomy of a tRNA gene cluster at region 42A of the D. melanogaster chromosome.

Authors:  P H Yen; N Davidson
Journal:  Cell       Date:  1980-11       Impact factor: 41.582

9.  Nucleotide sequence of genes coding for tRNAPhe and tRNATyr from a repeating unit of X. laevis DNA.

Authors:  F Müller; S G Clarkson
Journal:  Cell       Date:  1980-02       Impact factor: 41.582

10.  tRNA's and priming of RNA-directed DNA synthesis in mouse mammary tumor virus.

Authors:  G Peters; C Glover
Journal:  J Virol       Date:  1980-07       Impact factor: 5.103
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  12 in total

1.  Compilation of tRNA sequences and sequences of tRNA genes.

Authors:  M Sprinzl; N Dank; S Nock; A Schön
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  The sequences of two nuclear genes and a pseudogene for tRNA(Pro) from the higher plant Phaseolus vulgaris.

Authors:  G A Green; J H Weil; A Steinmetz
Journal:  Plant Mol Biol       Date:  1986-05       Impact factor: 4.076

3.  Sequence analysis of three tRNA(Phe) nuclear genes and a mutated gene, and one gene for tRNA(Ala) from Arabidopsis thaliana.

Authors:  K Akama; S Tanifuji
Journal:  Plant Mol Biol       Date:  1990-08       Impact factor: 4.076

4.  Inhibition of nascent-peptide release at translation termination.

Authors:  J Cao; A P Geballe
Journal:  Mol Cell Biol       Date:  1996-12       Impact factor: 4.272

5.  Modulation of transcriptional activity and stable complex formation by 5'-flanking regions of mouse tRNAHis genes.

Authors:  M J Morry; J D Harding
Journal:  Mol Cell Biol       Date:  1986-01       Impact factor: 4.272

6.  The processing of wild type and mutant forms of rat nuclear pre-tRNA(Lys) by the homologous RNase P.

Authors:  T E Paisley; G C Van Tuyle
Journal:  Nucleic Acids Res       Date:  1994-08-25       Impact factor: 16.971

7.  Genes and pseudogenes in a reiterated rat tRNA gene cluster.

Authors:  A Rosen; S Sarid; V Daniel
Journal:  Nucleic Acids Res       Date:  1984-06-25       Impact factor: 16.971

8.  Using iodinated single-stranded M13 probes to facilitate rapid DNA sequence analysis--nucleotide sequence of a mouse lysine tRNA gene.

Authors:  J H Han; J D Harding
Journal:  Nucleic Acids Res       Date:  1983-04-11       Impact factor: 16.971

9.  Isolation and characterization of genomic mouse DNA clones containing sequences homologous to tRNAs and 5S rRNA.

Authors:  J C Hu; B D Cote; E Lund; J E Dahlberg
Journal:  Nucleic Acids Res       Date:  1983-07-25       Impact factor: 16.971

10.  Structure and evolution of a mouse tRNA gene cluster encoding tRNAAsp, tRNAGly and tRNAGlu and an unlinked, solitary gene encoding tRNAAsp.

Authors:  J E Looney; J D Harding
Journal:  Nucleic Acids Res       Date:  1983-12-20       Impact factor: 16.971
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