Literature DB >> 6289272

Characterization of a rat tRNA gene cluster containing the genes for tRNAAsp, tRNAGly and tRNAGlu, and pseudogenes.

K Shibuya, S Noguchi, S Nishimura, T Sekiya.   

Abstract

The putative genes for tRNAGAUAsp(C), tRNAGGAGly(G) and tRNAGAGGlu are in a cluster on the rat chromosome and are present exclusively in a 3.3 kb region cleaved with a restriction endonuclease EcoRI. The cluster reiterates about 10 times on the haploid DNA. Four lambda clones each containing an independent repeating unit were isolated from a rat gene library. The studies on the cloned DNA revealed that the length of the repeating unit including the 3.3 kb EcoRI fragment was at least 13.5 kb. Nucleotide sequence analysis of the 3.3 kb DNA in the isolated clones showed sequence variations among the repeating units and incomplete genes for tRNAGly and tRNAGlu within the clusters.

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Year:  1982        PMID： 6289272      PMCID： PMC320812          DOI： 10.1093/nar/10.14.4441

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  22 in total

1.  The rat serum albumin gene: analysis of cloned sequences.

Authors:  T D Sargent; J R Wu; J M Sala-Trepat; R B Wallace; A A Reyes; J Bonner
Journal:  Proc Natl Acad Sci U S A       Date:  1979-07       Impact factor: 11.205

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Cloning of yeast transfer RNA genes in Escherichia coli.

Authors:  J S Beckmann; P F Johnson; J Abelson
Journal:  Science       Date:  1977-04-08       Impact factor: 47.728

4.  Proportion of HeLa cell genome complementary to transfer RNA and 5 s RNA.

Authors:  L Hatlen; G Attardi
Journal:  J Mol Biol       Date:  1971-03-28       Impact factor: 5.469

5.  Reiterated transfer RNA genes of Xenopus laevis.

Authors:  S G Clarkson; M L Birnstiel; V Serra
Journal:  J Mol Biol       Date:  1973-09-15       Impact factor: 5.469

6.  Arangement of transfer-RNA -genes in yeast.

Authors:  H Feldman
Journal:  Nucleic Acids Res       Date:  1976-09       Impact factor: 16.971

7.  Kinetic complexity of RNA molecules.

Authors:  M L Birnstiel; B H Sells; I F Purdom
Journal:  J Mol Biol       Date:  1972-01-14       Impact factor: 5.469

8.  Low molecular weight RNA species from chromatin.

Authors:  W F Marzluff; E L White; R Benjamin; R C Huang
Journal:  Biochemistry       Date:  1975-08-12       Impact factor: 3.162

9.  Base sequence complexity of the stable RNA species of Drosophila melanogaster.

Authors:  L Weber; E Berger
Journal:  Biochemistry       Date:  1976-12-14       Impact factor: 3.162

10.  Nucleotide sequence of genes coding for tRNAPhe and tRNATyr from a repeating unit of X. laevis DNA.

Authors:  F Müller; S G Clarkson
Journal:  Cell       Date:  1980-02       Impact factor: 41.582
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  13 in total

1.  Two nucleotides next to the anticodon of cytoplasmic rat tRNA(Asp) are likely generated by RNA editing.

Authors:  H Beier; M C Lee; T Sekiya; Y Kuchino; S Nishimura
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

2.  Modulation of transcriptional activity and stable complex formation by 5'-flanking regions of mouse tRNAHis genes.

Authors:  M J Morry; J D Harding
Journal:  Mol Cell Biol       Date:  1986-01       Impact factor: 4.272

3.  Nucleotide sequence of a mouse tRNALeu gene.

Authors:  B M Ross; J E Looney; J D Harding
Journal:  Nucleic Acids Res       Date:  1986-07-11       Impact factor: 16.971

4.  A human tRNAGlu gene of high transcriptional activity.

Authors:  J P Goddard; M Squire; M Bienz; J D Smith
Journal:  Nucleic Acids Res       Date:  1983-05-11       Impact factor: 16.971

5.  Molecular cloning, sequence analysis and in vitro expression of a rat tRNA gene cluster.

Authors:  D R Makowski; R A Haas; K P Dolan; D Grunberger
Journal:  Nucleic Acids Res       Date:  1983-12-20       Impact factor: 16.971

6.  Using iodinated single-stranded M13 probes to facilitate rapid DNA sequence analysis--nucleotide sequence of a mouse lysine tRNA gene.

Authors:  J H Han; J D Harding
Journal:  Nucleic Acids Res       Date:  1983-04-11       Impact factor: 16.971

7.  Characterization and nucleotide sequence of a chicken gene encoding an opal suppressor tRNA and its flanking DNA segments.

Authors:  D L Hatfield; B S Dudock; F C Eden
Journal:  Proc Natl Acad Sci U S A       Date:  1983-08       Impact factor: 11.205

8.  Transcription factor binding is limited by the 5'-flanking regions of a Drosophila tRNAHis gene and a tRNAHis pseudogene.

Authors:  L Cooley; J Schaack; D J Burke; B Thomas; D Söll
Journal:  Mol Cell Biol       Date:  1984-12       Impact factor: 4.272

9.  Structure and evolution of a mouse tRNA gene cluster encoding tRNAAsp, tRNAGly and tRNAGlu and an unlinked, solitary gene encoding tRNAAsp.

Authors:  J E Looney; J D Harding
Journal:  Nucleic Acids Res       Date:  1983-12-20       Impact factor: 16.971

10.  Genomic organization of the human asparagine transfer RNA genes: localization to the U1 RNA gene and class I pseudogene repeat units.

Authors:  R A Buckland
Journal:  Am J Hum Genet       Date:  1989-08       Impact factor: 11.025
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