Literature DB >> 6285292

Nucleotide sequence definition of a major human repeated DNA, the Hind III 1.9 kb family.

L Manuelidis.   

Abstract

A human Hind III 1.9 kb repeated DNA fragment was isolated and cloned in pBR322. A cloned member that hybridized predominantly to the 1.9 kb Hind III band in a digest of whole human DNA was chosen for sequencing. It is an 1894 bp fragment that shows no significant internal repeats. Few pCG residues are observed in the sequence and there are numerous stop codons. Detailed sequence comparisons confirm this is a novel class of repeats that is not related to previously characterized human satellite DNAs or Alu sequences. At least a portion of the sequence described is conserved in evolution.

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Year:  1982        PMID: 6285292      PMCID: PMC320701          DOI: 10.1093/nar/10.10.3211

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  16 in total

1.  Improved estimation of secondary structure in ribonucleic acids.

Authors:  I Tinoco; P N Borer; B Dengler; M D Levin; O C Uhlenbeck; D M Crothers; J Bralla
Journal:  Nat New Biol       Date:  1973-11-14

2.  Properties of a supercoiled deoxyribonucleic acid-protein relaxation complex and strand specificity of the relaxation event.

Authors:  D B Clewell; D R Helinski
Journal:  Biochemistry       Date:  1970-10-27       Impact factor: 3.162

3.  Nucleotide sequence of mouse satellite DNA.

Authors:  W Hörz; W Altenburger
Journal:  Nucleic Acids Res       Date:  1981-02-11       Impact factor: 16.971

4.  Sequence definition and organization of a human repeated DNA.

Authors:  J C Wu; L Manuelidis
Journal:  J Mol Biol       Date:  1980-09-25       Impact factor: 5.469

5.  Cloning and characterization of DNA sequences surrounding the human gamma-, delta-, and beta-globin genes.

Authors:  R E Kaufman; P J Kretschmer; J W Adams; H C Coon; W F Anderson; A W Nienhuis
Journal:  Proc Natl Acad Sci U S A       Date:  1980-07       Impact factor: 11.205

Review 6.  DNA methylation and gene function.

Authors:  A Razin; A D Riggs
Journal:  Science       Date:  1980-11-07       Impact factor: 47.728

7.  Complex and simple sequences in human repeated DNAs.

Authors:  L Manuelidis
Journal:  Chromosoma       Date:  1978-03-22       Impact factor: 4.316

8.  Structural analysis of interspersed repetitive polymerase III transcription units in human DNA.

Authors:  J Pan; J T Elder; C H Duncan; S M Weissman
Journal:  Nucleic Acids Res       Date:  1981-03-11       Impact factor: 16.971

9.  Repeating restriction fragments of human DNA.

Authors:  L Manuelidis
Journal:  Nucleic Acids Res       Date:  1976-11       Impact factor: 16.971

10.  Novel classes of mouse repeated DNAs.

Authors:  L Manuelidis
Journal:  Nucleic Acids Res       Date:  1980-08-11       Impact factor: 16.971

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  33 in total

1.  Variation in genomic Alu repeat density as a basis for rapid construction of low resolution physical maps of human chromosomes.

Authors:  M J Lane; P G Waterbury; W T Carroll; A M Smardon; B D Faldasz; S M Peshick; S Mante; C S Huckaby; R E Kouri; D J Hanlon
Journal:  Chromosoma       Date:  1992-03       Impact factor: 4.316

2.  A prokaryotic viral sequence is expressed and conserved in mammalian brain.

Authors:  Yang-Hui Yeh; Vignesh Gunasekharan; Laura Manuelidis
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-19       Impact factor: 11.205

3.  Sequence analysis of a KpnI family member near the 3' end of human beta-globin gene.

Authors:  M Hattori; S Hidaka; Y Sakaki
Journal:  Nucleic Acids Res       Date:  1985-11-11       Impact factor: 16.971

4.  Evidence for transcription and potential translation of the human 1.9 kb HindIII repetitive element.

Authors:  B A Citron; P V Chaudary; D N Rao; S Kaufman
Journal:  Nucleic Acids Res       Date:  1986-04-11       Impact factor: 16.971

5.  Conservation in the 5' region of the long interspersed mouse L1 repeat: implications of comparative sequence analysis.

Authors:  E Mottez; P K Rogan; L Manuelidis
Journal:  Nucleic Acids Res       Date:  1986-04-11       Impact factor: 16.971

6.  Analysis of LINE-1 family sequences on a single monkey chromosome.

Authors:  T N Lee; M F Singer
Journal:  Nucleic Acids Res       Date:  1986-05-12       Impact factor: 16.971

7.  The sequence of a large L1Md element reveals a tandemly repeated 5' end and several features found in retrotransposons.

Authors:  D D Loeb; R W Padgett; S C Hardies; W R Shehee; M B Comer; M H Edgell; C A Hutchison
Journal:  Mol Cell Biol       Date:  1986-01       Impact factor: 4.272

8.  SINEs and LINEs cluster in distinct DNA fragments of Giemsa band size.

Authors:  T L Chen; L Manuelidis
Journal:  Chromosoma       Date:  1989-11       Impact factor: 4.316

9.  L1 sequences in HeLa extrachromosomal circular DNA: evidence for circularization by homologous recombination.

Authors:  R S Jones; S S Potter
Journal:  Proc Natl Acad Sci U S A       Date:  1985-04       Impact factor: 11.205

10.  Sequence analysis of Vicia faba repeated DNA, the FokI repeat element.

Authors:  A Kato; K Yakura; S Tanifuji
Journal:  Nucleic Acids Res       Date:  1984-08-24       Impact factor: 16.971

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