Literature DB >> 6283479

Nucleotide sequence of Physarum polycephalum 5.8S rRNA gene and its flanking regions.

T Otsuka, H Nomiyama, Y Sakaki, Y Takagi.   

Abstract

The nucleotide sequence of Physarum polycephalum 5.8S rRNA gene and its flanking regions has been determined. The homologies of the 5.8S rRNA sequence with those of Saccharomyces, Chlamydomonas and Xenopus were 56%, 50% and 52%, respectively. In spite of these relatively low homologies, its possible secondary structure was very similar to those of other species.

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Year:  1982        PMID： 6283479      PMCID： PMC320616          DOI： 10.1093/nar/10.7.2379

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  19 in total

1.  Complete nucleotide sequence of a 23S ribosomal RNA gene from Escherichia coli.

Authors:  J Brosius; T J Dull; H F Noller
Journal:  Proc Natl Acad Sci U S A       Date:  1980-01       Impact factor: 11.205

2.  A 5.8 S rRNA-like sequence in prokaryotic 23 S rRNA.

Authors:  R N Nazar
Journal:  FEBS Lett       Date:  1980-10-06       Impact factor: 4.124

3.  The organisation of genes for transfer RNA and ribosomal RNA in amoebae and plasmodia of Physarum polycephalum.

Authors:  L Hall; R Braun
Journal:  Eur J Biochem       Date:  1977-06-01

4.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

Review 5.  Collection of published 5S and 5.8S RNA sequences and their precursors.

Authors:  V A Erdmann
Journal:  Nucleic Acids Res       Date:  1981-01-10       Impact factor: 16.971

6.  Nucleotide sequence and structure of cytoplasmic 5S RNA and 5.8S RNA of Chlamydomonas reinhardii.

Authors:  J L Darlix; J D Rochaix
Journal:  Nucleic Acids Res       Date:  1981-03-25       Impact factor: 16.971

7.  Reactions at the termini of tRNA with T4 RNA ligase.

Authors:  A G Bruce; O C Uhlenbeck
Journal:  Nucleic Acids Res       Date:  1978-10       Impact factor: 16.971

8.  Mapping adenines, guanines, and pyrimidines in RNA.

Authors:  H Donis-Keller; A M Maxam; W Gilbert
Journal:  Nucleic Acids Res       Date:  1977-08       Impact factor: 16.971

9.  Nucleotide sequence relationships between vertebrate 5.8 S ribosomal RNAs.

Authors:  M S Khan; B E Maden
Journal:  Nucleic Acids Res       Date:  1977-07       Impact factor: 16.971

10.  Nucleotide sequence and conserved features of the 5.8 S rRNA coding region of Neurospora crassa.

Authors:  E Selker; C Yanofsky
Journal:  Nucleic Acids Res       Date:  1979-06-11       Impact factor: 16.971
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  9 in total

1.  A compilation of large subunit RNA sequences presented in a structural format.

Authors:  R R Gutell; G E Fox
Journal:  Nucleic Acids Res       Date:  1988       Impact factor: 16.971

2.  Nucleotide sequences of the 5.8S rRNAs of a mollusc and a porifer, and considerations regarding the secondary structure of 5.8S rRNA and its interaction with 28S rRNA.

Authors:  D Ursi; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1983-11-25       Impact factor: 16.971

3.  A universal model for the secondary structure of 5.8S ribosomal RNA molecules, their contact sites with 28S ribosomal RNAs, and their prokaryotic equivalent.

Authors:  J C Vaughn; S J Sperbeck; W J Ramsey; C B Lawrence
Journal:  Nucleic Acids Res       Date:  1984-10-11       Impact factor: 16.971

4.  Localization and DNA sequence around the initiation site of ribosomal RNA transcription in Physarum polycephalum.

Authors:  B Blum; T Seebeck; R Braun; P Ferris; V Vogt
Journal:  Nucleic Acids Res       Date:  1983-12-10       Impact factor: 16.971

5.  Direct repeats surrounding the ribosomal RNA genes of Physarum polycephalum.

Authors:  M Hattori; A Ljljana; Y Sakaki
Journal:  Nucleic Acids Res       Date:  1984-02-24       Impact factor: 16.971

6.  Nucleotide sequence of the 18S-26S rRNA intergene region of the sea urchin.

Authors:  B R Hindenach; D W Stafford
Journal:  Nucleic Acids Res       Date:  1984-02-10       Impact factor: 16.971

7.  Collection of published 5S and 5.8S ribosomal RNA sequences.

Authors:  V A Erdmann; J Wolters; E Huysmans; A Vandenberghe; R De Wachter
Journal:  Nucleic Acids Res       Date:  1984       Impact factor: 16.971

8.  Sequence analysis of the transcribed and 5' non-transcribed regions of the ribosomal RNA gene in Dictyostelium discoideum.

Authors:  T Ozaki; Y Hoshikawa; Y Iida; M Iwabuchi
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

9.  Complete nucleotide sequence of the 26S rRNA gene of Physarum polycephalum: its significance in gene evolution.

Authors:  T Otsuka; H Nomiyama; H Yoshida; T Kukita; S Kuhara; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  1983-06       Impact factor: 11.205
  9 in total

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