Literature DB >> 6264395

Detection of the catalytic activities of DNA polymerases and their associated exonucleases following SDS-polyacrylamide gel electrophoresis.

A Spanos, S G Sedgwick, G T Yarranton, U Hübscher, G R Banks.   

Abstract

A method is described to detect DNA polymerases and nucleases in homogeneous or crude enzyme preparations after electrophoresis in SDS-polyacrylamide gels(2) containing the appropriate template or substrate. DNA polymerases are electrophoresed in a gel containing gapped calf thymus DNA and after a renaturation treatment, the gel is incubated in a reaction mixture in which one deoxyribonucleoside triphosphate is [alpha-32P]-labelled. Incorporation of radioactivity into DNA is detected at the vicinity of the polymerase band by autoradiography. An associated nuclease activity can be measured after electrophoresis in a gel containing 32P-labelled gapped DNA, when nucleolytic digestion is seen as a clear band in the resulting autoradiogram. The gels can subsequently be stained with Coomassie blue to establish identical molecular weights of polymerase, nuclease and protein bands. Applications of this technique are discussed.

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Year:  1981        PMID: 6264395      PMCID: PMC326806          DOI: 10.1093/nar/9.8.1825

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  30 in total

1.  ENZYMATIC SYNTHESIS OF DEOXYRIBONUCLEIC ACID. XIV. FURTHER PURIFICATION AND PROPERTIES OF DEOXYRIBONUCLEIC ACID POLYMERASE OF ESCHERICHIA COLI.

Authors:  C C RICHARDSON; C L SCHILDKRAUT; H V APOSHIAN; A KORNBERG
Journal:  J Biol Chem       Date:  1964-01       Impact factor: 5.157

2.  Evidence that DNA polymerase-alpha of calf thymus contains a subunit of molecular weight 155000.

Authors:  A M Holmes; I P Hesslewood; I R Johnston
Journal:  Eur J Biochem       Date:  1976-02-16

3.  Persistence of deoxyribonucleic acid polymerase I and its 5'--3' exonuclease activity in PolA mutants of Escherichia coli K12.

Authors:  I R Lehman; J R Chien
Journal:  J Biol Chem       Date:  1973-11-25       Impact factor: 5.157

4.  Deoxyribonucleic acid polymerase: two distinct enzymes in one polypeptide. I. A proteolytic fragment containing the polymerase and 3' leads to 5' exonuclease functions.

Authors:  P Setlow; D Brutlag; A Kornberg
Journal:  J Biol Chem       Date:  1972-01-10       Impact factor: 5.157

5.  Genetic and molecular characteristics of X-ray-sensitive mutants of Escherichia coli defective in repair synthesis.

Authors:  T Kato; S Kondo
Journal:  J Bacteriol       Date:  1970-11       Impact factor: 3.490

6.  Selective elimination of the exonuclease activity of the deoxyribonucleic acid polymerase from Escherichia coli B by limited proteolysis.

Authors:  H Klenow; I Henningsen
Journal:  Proc Natl Acad Sci U S A       Date:  1970-01       Impact factor: 11.205

7.  Analysis of DNA polymerases II and 3 in mutants of Escherichia coli thermosensitive for DNA synthesis.

Authors:  M L Gefter; Y Hirota; T Kornberg; J A Wechsler; C Barnoux
Journal:  Proc Natl Acad Sci U S A       Date:  1971-12       Impact factor: 11.205

8.  A DNA polymerase from Ustilago maydis. 2. Properties of the associated deoxyribonuclease activity.

Authors:  G R Banks; G T Yarranton
Journal:  Eur J Biochem       Date:  1976-02-02

9.  A DNA polymerase from Ustilago maydis. 1. Purification and properties of the polymerase activity.

Authors:  G R Banks; W K Holloman; M V Kairis; A Spanos; G T Yarranton
Journal:  Eur J Biochem       Date:  1976-02-02

10.  Purification and DNA synthesis in cell-free extracts: properties of DNA polymerase II.

Authors:  T Kornberg; M L Gefter
Journal:  Proc Natl Acad Sci U S A       Date:  1971-04       Impact factor: 11.205

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  56 in total

1.  Cassette mutagenesis of the reverse transcriptase of human immunodeficiency virus type 1.

Authors:  P L Boyer; A L Ferris; S H Hughes
Journal:  J Virol       Date:  1992-02       Impact factor: 5.103

2.  Streptococcus pneumoniae polA gene is expressed in Escherichia coli and can functionally substitute for the E. coli polA gene.

Authors:  P López; S Martinez; A Diaz; M Espinosa
Journal:  J Bacteriol       Date:  1987-10       Impact factor: 3.490

3.  Plasmid cloning and expression of the E. coli polA (+) gene in S. cerevisiae.

Authors:  A Spanos; S G Sedgwick
Journal:  Curr Genet       Date:  1984-07       Impact factor: 3.886

4.  Evidence for a role for DNA polymerase beta in mammalian meiosis.

Authors:  A W Plug; C A Clairmont; E Sapi; T Ashley; J B Sweasy
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

5.  A genetic system to identify DNA polymerase beta mutator mutants.

Authors:  S L Washington; M S Yoon; A M Chagovetz; S X Li; C A Clairmont; B D Preston; K A Eckert; J B Sweasy
Journal:  Proc Natl Acad Sci U S A       Date:  1997-02-18       Impact factor: 11.205

6.  Purification and characterization of a 100 kDa DNA polymerase from cauliflower inflorescence.

Authors:  H Seto; M Hatanaka; S Kimura; M Oshige; Y Tsuya; Y Mizushina; T Sawado; N Aoyagi; T Matsumoto; J Hashimoto; K Sakaguchi
Journal:  Biochem J       Date:  1998-06-01       Impact factor: 3.857

Review 7.  DNA-protein interactions during replication of genetic elements of bacteria.

Authors:  J Nesvera; J Hochmannová
Journal:  Folia Microbiol (Praha)       Date:  1985       Impact factor: 2.099

8.  Heterogeneity of mammalian DNA ligase detected on activity and DNA sequencing gels.

Authors:  M Mezzina; A Sarasin; N Politi; U Bertazzoni
Journal:  Nucleic Acids Res       Date:  1984-06-25       Impact factor: 16.971

9.  Streptococcus pneumoniae DNA polymerase I lacks 3'-to-5' exonuclease activity: localization of the 5'-to-3' exonucleolytic domain.

Authors:  A Diaz; M E Pons; S A Lacks; P Lopez
Journal:  J Bacteriol       Date:  1992-03       Impact factor: 3.490

10.  Identification of four Entamoeba histolytica organellar DNA polymerases of the family B and cellular localization of the Ehodp1 gene and EhODP1 protein.

Authors:  María Esther Herrera-Aguirre; Juan Pedro Luna-Arias; María Luisa Labra-Barrios; Esther Orozco
Journal:  J Biomed Biotechnol       Date:  2010-03-15
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