Literature DB >> 6179628

Human 7SL RNA consists of a 140 nucleotide middle-repetitive sequence inserted in an alu sequence.

E Ullu, S Murphy, M Melli.   

Abstract

We have cloned and sequenced a cDNA copy of in vitro-polyadenylated 7SL RNA of HeLa cells. The cloned fragment is 303 bp long and has a composite structure. A central block of 140 bp is homologous to a new set of human middle-repetitive sequences. This block appears to be inserted in an Alu consensus sequence, 100 bp from the 5' end and 40 bp from the 3' end of the Alu monomer. Two 6 bp direct repeats are found at the junction between the Alu flanking sequences and the central element. The analysis of several clones shows the existence of sequence microheterogeneity in the 5' portion of the molecule. The 7L DNA probably represents a subset of the Alu family of DNA, highly conserved in evolution.

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Year:  1982        PMID: 6179628     DOI: 10.1016/0092-8674(82)90103-9

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  87 in total

1.  Signal recognition particle components in the nucleolus.

Authors:  J C Politz; S Yarovoi; S M Kilroy; K Gowda; C Zwieb; T Pederson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

2.  Prediction of signal recognition particle RNA genes.

Authors:  Marco Regalia; Magnus Alm Rosenblad; Tore Samuelsson
Journal:  Nucleic Acids Res       Date:  2002-08-01       Impact factor: 16.971

3.  Structure of the archaebacterial 7S RNA molecule.

Authors:  B P Kaine
Journal:  Mol Gen Genet       Date:  1990-05

4.  A nomenclature for all signal recognition particle RNAs.

Authors:  Christian Zwieb; Rob W van Nues; Magnus Alm Rosenblad; Jeremy D Brown; Tore Samuelsson
Journal:  RNA       Date:  2005-01       Impact factor: 4.942

5.  Transfer RNA-like structure of the human Alu family: implications of its generation mechanism and possible functions.

Authors:  N Okada
Journal:  J Mol Evol       Date:  1990-12       Impact factor: 2.395

6.  SRP-RNA sequence alignment and secondary structure.

Authors:  N Larsen; C Zwieb
Journal:  Nucleic Acids Res       Date:  1991-01-25       Impact factor: 16.971

7.  Binding sites of the 9- and 14-kilodalton heterodimeric protein subunit of the signal recognition particle (SRP) are contained exclusively in the Alu domain of SRP RNA and contain a sequence motif that is conserved in evolution.

Authors:  K Strub; J Moss; P Walter
Journal:  Mol Cell Biol       Date:  1991-08       Impact factor: 4.272

8.  Amplification dynamics of human-specific (HS) Alu family members.

Authors:  M A Batzer; V A Gudi; J C Mena; D W Foltz; R J Herrera; P L Deininger
Journal:  Nucleic Acids Res       Date:  1991-07-11       Impact factor: 16.971

9.  Saccharomyces SRP RNA secondary structures: a conserved S-domain and extended Alu-domain.

Authors:  Rob W Van Nues; Jeremy D Brown
Journal:  RNA       Date:  2004-01       Impact factor: 4.942

10.  Activation of RNA polymerase III transcription of human Alu repetitive elements by adenovirus type 5: requirement for the E1b 58-kilodalton protein and the products of E4 open reading frames 3 and 6.

Authors:  B Panning; J R Smiley
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

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