Literature DB >> 6168311

Water transport and ion-water interaction in the gramicidin channel.

J A Dani, D G Levitt.   

Abstract

The diffuse permeability and the diffusion coefficient of water (Dw) in the gramicidin channel is determined from the osmotic water permeability of the channel and "single file" pore theory. Dw is about 7% of the self-diffusion coefficient of bulk water. The diffusion coefficient of a single water molecule alone in the channel is also determined and is about equal to the value in bulk water. This provides an estimate of the mobility of water on the channel walls in the absence of water-water interaction. Since the gramicidin channel walls should be representative of uncharged polar protein surfaces, this result provides direct evidence that the presence of a cation in the channel reduces the hydraulic water permeability by a factor ranging from 60 for Tl+ to 5 for Na+. The diffusion coefficient of a cation (Dc) in the channel is estimated and compared with Dw. For Na+ it is found that Dc approximately equal to Dw, which implies that the movement of the row of water molecules through the channel determines the local mobility of Na+. Thus, it seems that short range ion-wall interactions are not important in determining the channel conductance for Na+. In contrast, for Li+, local ion-wall interactions probably do limit the conductance.

Entities:  

Mesh:

Substances:

Year:  1981        PMID: 6168311      PMCID: PMC1327538          DOI: 10.1016/S0006-3495(81)84805-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  21 in total

1.  Properties of amphotericin B channels in a lipid bilayer.

Authors:  L N Ermishkin; K M Kasumov; V M Potseluyev
Journal:  Biochim Biophys Acta       Date:  1977-11-01

2.  Gramicidin A crystals contain two cation binding sites per channel.

Authors:  R E Koeppe; J M Berg; K O Hodgson; L Stryer
Journal:  Nature       Date:  1979-06-21       Impact factor: 49.962

3.  Ionic selectivity, saturation, and block in gramicidin A channels. II. Saturation behavior of single channel conductances and evidence for the existence of multiple binding sites in the channel.

Authors:  E Neher; J Sandblom; G Eisenman
Journal:  J Membr Biol       Date:  1978-04-26       Impact factor: 1.843

4.  Conformation and molecular mechanisms of carriers and channels.

Authors:  D W Urry; M M Long; M Jacobs; R D Harris
Journal:  Ann N Y Acad Sci       Date:  1975-12-30       Impact factor: 5.691

5.  Ionic channels in excitable membranes. Current problems and biophysical approaches.

Authors:  B Hille
Journal:  Biophys J       Date:  1978-05       Impact factor: 4.033

6.  Electrostatic calculations for an ion channel. I. Energy and potential profiles and interactions between ions.

Authors:  D G Levitt
Journal:  Biophys J       Date:  1978-05       Impact factor: 4.033

7.  Number of water molecules coupled to the transport of sodium, potassium and hydrogen ions via gramicidin, nonactin or valinomycin.

Authors:  D G Levitt; S R Elias; J M Hautman
Journal:  Biochim Biophys Acta       Date:  1978-09-22

8.  Electrostatic calculations for an ion channel. II. Kinetic behavior of the gramicidin A channel.

Authors:  D G Levitt
Journal:  Biophys J       Date:  1978-05       Impact factor: 4.033

9.  Interaction of ions and water in gramicidin A channels: streaming potentials across lipid bilayer membranes.

Authors:  P A Rosenberg; A Finkelstein
Journal:  J Gen Physiol       Date:  1978-09       Impact factor: 4.086

10.  Water permeability of gramicidin A-treated lipid bilayer membranes.

Authors:  P A Rosenberg; A Finkelstein
Journal:  J Gen Physiol       Date:  1978-09       Impact factor: 4.086

View more
  24 in total

1.  Proton mobilities in water and in different stereoisomers of covalently linked gramicidin A channels.

Authors:  S Cukierman
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

2.  Simulation study of a gramicidin/lipid bilayer system in excess water and lipid. II. Rates and mechanisms of water transport.

Authors:  S W Chiu; S Subramaniam; E Jakobsson
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

3.  Desformylgramicidin: a model channel with an extremely high water permeability.

Authors:  S M Saparov; Y N Antonenko; R E Koeppe; P Pohl
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

4.  Time-correlation analysis of simulated water motion in flexible and rigid gramicidin channels.

Authors:  S W Chiu; E Jakobsson; S Subramaniam; J A McCammon
Journal:  Biophys J       Date:  1991-07       Impact factor: 4.033

5.  Determinants of water permeability through nanoscopic hydrophilic channels.

Authors:  Guillem Portella; Bert L de Groot
Journal:  Biophys J       Date:  2009-02       Impact factor: 4.033

6.  On the equivalent pore radius.

Authors:  A K Solomon
Journal:  J Membr Biol       Date:  1986       Impact factor: 1.843

7.  The 20-pS chloride channel of the human airway epithelium.

Authors:  M Duszyk; A S French; S F Man
Journal:  Biophys J       Date:  1990-02       Impact factor: 4.033

8.  Permeation through an open channel: Poisson-Nernst-Planck theory of a synthetic ionic channel.

Authors:  D Chen; J Lear; B Eisenberg
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

9.  Permeation through the calcium release channel of cardiac muscle.

Authors:  D Chen; L Xu; A Tripathy; G Meissner; B Eisenberg
Journal:  Biophys J       Date:  1997-09       Impact factor: 4.033

10.  Molecular dynamics simulation of cation motion in water-filled gramicidinlike pores.

Authors:  W K Lee; P C Jordan
Journal:  Biophys J       Date:  1984-12       Impact factor: 4.033

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.