Literature DB >> 77688

Electrostatic calculations for an ion channel. II. Kinetic behavior of the gramicidin A channel.

D G Levitt.   

Abstract

A theoretical model of the gramicidin A channel is presented and the kinetic behavior of the model is derived and compared with previous experimental results. The major assumption of the model is that the only interaction between ions in a multiply-occupied channel is electrostatic. The electrostatic calculations indicate in a multiply-occupied channel is electrostatic. The electrostatic calculations indicate that there will be potential wells at each end of the channel and, at high concentrations, that both wells can be occupied. The kinetics are based on two reaction steps: movement of the ion from the bulk solution to the well and movement between the two wells. The kinetics for this reaction rate approach are identical to those based on the Nernst-Planck equation in the limit where the movement between the two wells is rate limiting. The experimental results for sodium and potassium are consistent with a maximum of two ions per channel. To explain the thallium results it is necessary to allow three ions per channel. It is shown that this case is compatible with the electrostatic calculations if the presence of an anion is included. The theoretical kinetics are in reasonable quantitative agreement with the following experimental measurements: single channel conductance of sodium, potassium, and thallium; bi-ionic potential and permeability ratio between sodium-potassium and potassium-thallium; the limiting conductance of potassium and thallium at high applied voltages; current-voltage curves for sodium and potassium at low (but not high) concentrations; and the inhibition of sodium conductance by thallium. The results suggest that the potential well is located close to the channel mouth and that the conductance is partially limited by the rate going from the bulk solution to the well. For thallium, this entrance rate is probably diffusion limited.

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Year:  1978        PMID: 77688      PMCID: PMC1473431          DOI: 10.1016/S0006-3495(78)85486-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  9 in total

1.  Diffusion-limited ion flow through pores.

Authors:  P Läuger
Journal:  Biochim Biophys Acta       Date:  1976-12-02

2.  Ion transport through pores: a rate-theory analysis.

Authors:  P Läuger
Journal:  Biochim Biophys Acta       Date:  1973-07-06

3.  Ion transfer across lipid membranes in the presence of gramicidin A. II. The ion selectivity.

Authors:  V B Myers; D A Haydon
Journal:  Biochim Biophys Acta       Date:  1972-08-09

4.  Ion transfer across lipid membranes in the presence of gramicidin A. I. Studies of the unit conductance channel.

Authors:  S B Hladky; D A Haydon
Journal:  Biochim Biophys Acta       Date:  1972-08-09

5.  Current-voltage curves of porous membranes in the presence of pore-blocking ions. I. Narrow pores containing no more than one moving ion.

Authors:  K Heckmann; B Lindemann; J Schnakenberg
Journal:  Biophys J       Date:  1972-06       Impact factor: 4.033

6.  Ion transport across sodium channels in biological membranes.

Authors:  Y A Chizmadjev; S K Aityan
Journal:  J Theor Biol       Date:  1977-02-07       Impact factor: 2.691

7.  Ionic selectivity, saturation and block in gramicidin A channels: I. Theory for the electrical properties of ion selective channels having two pairs of binding sites and multiple conductance states.

Authors:  J Sandblom; G Eisenman; E Neher
Journal:  J Membr Biol       Date:  1977-03-23       Impact factor: 1.843

8.  Electrostatic calculations for an ion channel. I. Energy and potential profiles and interactions between ions.

Authors:  D G Levitt
Journal:  Biophys J       Date:  1978-05       Impact factor: 4.033

9.  Ionic selectivity, saturation, and block in sodium channels. A four-barrier model.

Authors:  B Hille
Journal:  J Gen Physiol       Date:  1975-11       Impact factor: 4.086

  9 in total
  32 in total

1.  Permeation of ions across the potassium channel: Brownian dynamics studies.

Authors:  S H Chung; T W Allen; M Hoyles; S Kuyucak
Journal:  Biophys J       Date:  1999-11       Impact factor: 4.033

2.  Model channel ion currents in NaCl-extended simple point charge water solution with applied-field molecular dynamics.

Authors:  P S Crozier; D Henderson; R L Rowley; D D Busath
Journal:  Biophys J       Date:  2001-12       Impact factor: 4.033

3.  Solution of the Poisson-Nernst-Planck equations in the cell-substrate interface.

Authors:  M Pabst; G Wrobel; S Ingebrandt; F Sommerhage; A Offenhäusser
Journal:  Eur Phys J E Soft Matter       Date:  2007-08-29       Impact factor: 1.890

4.  Nuclear magnetic resonance of 23Na ions interacting with the gramicidin channel.

Authors:  H Monoi
Journal:  Biophys J       Date:  1985-10       Impact factor: 4.033

5.  Rate theoretical analysis of ion-selectivity in membrane channels with elastically bound ligands.

Authors:  H Schröder
Journal:  Eur Biophys J       Date:  1985       Impact factor: 1.733

6.  Equilibrium binding constants for the group I metal cations with gramicidin-A determined by competition studies and T1+-205 nuclear magnetic resonance spectroscopy.

Authors:  J F Hinton; W L Whaley; D Shungu; R E Koeppe; F S Millett
Journal:  Biophys J       Date:  1986-09       Impact factor: 4.033

7.  Thallous ion movements through gramicidin channels incorporated in lipid monolayers supported by mercury.

Authors:  Lucia Becucci; Maria Rosa Moncelli; Rolando Guidelli
Journal:  Biophys J       Date:  2002-02       Impact factor: 4.033

8.  Energy barrier presented to ions by the vestibule of the biological membrane channel.

Authors:  M Hoyles; S Kuyucak; S H Chung
Journal:  Biophys J       Date:  1996-04       Impact factor: 4.033

9.  Receptors and functional linkage in membrane permeability: a quantum mechanical model.

Authors:  C J Lumsden
Journal:  Bull Math Biol       Date:  1986       Impact factor: 1.758

10.  The permeation properties of small organic cations in gramicidin A channels.

Authors:  S A Seoh; D Busath
Journal:  Biophys J       Date:  1993-04       Impact factor: 4.033

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