Literature DB >> 6098301

Does pyridoxal 5'-phosphate function in glycogen phosphorylase as an electrophilic or a general acid catalyst?

H W Klein, M J Im, D Palm, E J Helmreich.   

Abstract

alpha-D-Glucose 1-diphosphate interacts with pyridoxal-reconstituted rabbit muscle phosphorylase b activated by AMP (AMP-S). Under these conditions, the glucose moiety of alpha-D-[14C]glucose 1-diphosphate is transferred to limit dextrin forming alpha(1----4) glycosidic bonds and simultaneously releasing pyrophosphate as shown by 31P NMR spectroscopy. Thus, specific structural requirements invoked to explain the reactions of pyridoxal(5')diphospho(1)-alpha-D-glucose need not to be assumed in the case of the reactions of alpha-D-glucose 1-diphosphate. Dianions isomorphous to phosphate activate pyridoxal phosphorylase regardless of their pK values while the same anions, when bound covalently to pyridoxal, are inactive. Thus, anions bound noncovalently to pyridoxal phosphorylase act differently than anions linked covalently to pyridoxal, such as the 5'-phosphate group of pyridoxal 5'-phosphate, which is postulated to be part of a proton donor-acceptor pathway. The reaction of 2,6-anhydro-1-deoxy-D-gluco-hept-1-enitol (heptenitol) with phosphorylase yields, in the presence of orthophosphate as a glycosyl acceptor, 1-deoxy-D-gluco-heptulose 2-phosphate (heptulose-2-P). This sugar phosphate is unreactive but a potent competitive inhibitor for rabbit muscle phosphorylase b and potato phosphorylase with respect to alpha-D-glucose 1-phosphate: Ki = 14 X 10(-6) M and 1.9 X 10(-6) M, respectively.(ABSTRACT TRUNCATED AT 250 WORDS)

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Year:  1984        PMID: 6098301     DOI: 10.1021/bi00319a027

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  5 in total

1.  Activator anion binding site in pyridoxal phosphorylase b: the binding of phosphite, phosphate, and fluorophosphate in the crystal.

Authors:  N G Oikonomakos; S E Zographos; K E Tsitsanou; L N Johnson; K R Acharya
Journal:  Protein Sci       Date:  1996-12       Impact factor: 6.725

2.  Excursions in biophysics by a classical enzymologist.

Authors:  E J Helmreich
Journal:  Protein Sci       Date:  1994-03       Impact factor: 6.725

3.  Probing the ionization state of substrate alpha-D-glucopyranosyl phosphate bound to glycogen phosphorylase b.

Authors:  I P Street; S G Withers
Journal:  Biochem J       Date:  1995-06-15       Impact factor: 3.857

4.  31P NMR relaxation studies of the activation of the coenzyme phosphate of glycogen phosphorylase. The role of motion of the bound phosphate.

Authors:  S G Withers; N B Madsen; B D Sykes
Journal:  Biophys J       Date:  1985-12       Impact factor: 4.033

5.  Catalysis in the crystal: synchrotron radiation studies with glycogen phosphorylase b.

Authors:  J Hajdu; K R Acharya; D I Stuart; P J McLaughlin; D Barford; N G Oikonomakos; H Klein; L N Johnson
Journal:  EMBO J       Date:  1987-02       Impact factor: 11.598

  5 in total

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