Literature DB >> 3937556

31P NMR relaxation studies of the activation of the coenzyme phosphate of glycogen phosphorylase. The role of motion of the bound phosphate.

S G Withers, N B Madsen, B D Sykes.   

Abstract

Spin-lattice and spin-spin relaxation rates (1/T1 and 1/T2) have been determined for the catalytically essential coenzyme phosphate at the active site of glycogen phosphorylase in both activated (R state) and inactive (T state) conformations of the enzyme. Dipolar contributions to 31P relaxation due to exchangeable protons on the phosphate group have been determined by measurement of relaxation rates at different concentrations of H2O and D2O, and field dependence studies have been performed to estimate the contribution of chemical shift anisotropy to the remaining 31P relaxation in D2O. At 109 MHz, dipolar relaxation from exchangeable protons was found to account for 50% of the spin-lattice relaxation for activated phosphorylase in 75% H2O, the remainder being due to chemical shift anisotropy. The spin-lattice relaxation rates in D2O for R-state glycogen phosphorylase are very similar to those measured for other proteins of very different size such as actin (Brauer, M., and B. D. Sykes, 1981, Biochemistry. 20:6767-6775), alkaline phosphatase (Coleman, J. E., I. D. Armitage, J. F. Chlebowski, J. D. Otvos, and A. J. M. S. Uiterkamp, 1979), and phosphoglucomutase (Rhyu, G. I., W. J. Ray, Jr., and J. L. Markley, 1984, Biochemistry. 23:252-260). In inactive (T state) phosphorylase the spin-lattice relaxation rates were almost an order of magnitude slower, while the spin-spin relaxation rates were essentially identical. These results have been analyzed by calculating the theoretically expected 31P relaxation rates in the presence of internal motions that are included in the relaxation calculation using the model-free approach of Lipari and Szabo (1982, J. Am. Chem. Soc. 104:4564-4559). The analysis suggests the coenzyme phosphate is relatively immobilized in the activated enzymic conformation, but in the inactive (Tstate) conformation it is considerably more mobile with a rotational correlation time one to two orders of magnitude smaller. Since the spin-lattice relaxation rate for the active R-state (immobilized) phosphate is similar to that observed in other phosphoenzymes of different size it is suggested that a librational motion on the nanosecond time scale may constitute a common spin-lattice relaxation pathway for phosphates in macromolecules. The consequences of phosphate motion in terms of recent suggestions concerning the environment and the catalytic role of the coenzyme phosphate are discussed.

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Year:  1985        PMID: 3937556      PMCID: PMC1329434          DOI: 10.1016/S0006-3495(85)83864-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  31 in total

1.  The pyridoxal 5' -phosphate site in rabbit skeletal muscle glycogen phosphorylase b: an ultraviolet and 1H and 31P nuclear magnetic resonance spectroscopic study.

Authors:  K Feldmann; E J Helmreich
Journal:  Biochemistry       Date:  1976-06-01       Impact factor: 3.162

2.  Effect of phosphate analogues on the activity of pyridoxal reconstituted glycogen phosphorylase.

Authors:  R F Parrish; R J Uhing; D J Graves
Journal:  Biochemistry       Date:  1977-11-01       Impact factor: 3.162

3.  Conformational transitions in glycogen phosphorylase reported by covalently bound pyridoxamine derivatives.

Authors:  K Feldmann; B J Gaugler; H Winkler; E J Helmreich
Journal:  Biochemistry       Date:  1974-05-07       Impact factor: 3.162

4.  Subunit interactions and their relationship to the allosteric properties of rabbit skeletal muscle phosphorylase b.

Authors:  L L Kastenschmidt; J Kastenschmidt; E Helmreich
Journal:  Biochemistry       Date:  1968-10       Impact factor: 3.162

5.  Does pyridoxal 5'-phosphate function in glycogen phosphorylase as an electrophilic or a general acid catalyst?

Authors:  H W Klein; M J Im; D Palm; E J Helmreich
Journal:  Biochemistry       Date:  1984-11-20       Impact factor: 3.162

6.  Crystallographic studies on the activity of glycogen phosphorylase b.

Authors:  I T Weber; L N Johnson; K S Wilson; D G Yeates; D L Wild; J A Jenkins
Journal:  Nature       Date:  1978-08-03       Impact factor: 49.962

7.  31P nuclear magnetic resonance studies of glycogen phosphorylase from rabbit skeletal muscle: ionization states of pyridoxal 5'-phosphate.

Authors:  K Feldmann; W E Hull
Journal:  Proc Natl Acad Sci U S A       Date:  1977-03       Impact factor: 11.205

8.  Interactions between native and chemically modified subunits of matrix-bound glycogen phosphorylase.

Authors:  K Feldmann; H Zeisel; E Helmreich
Journal:  Proc Natl Acad Sci U S A       Date:  1972-08       Impact factor: 11.205

9.  Location of pyridoxal phosphate in glycogen phosphorylase a.

Authors:  J Sygusch; N B Madsen; P J Kasvinsky; R J Fletterick
Journal:  Proc Natl Acad Sci U S A       Date:  1977-11       Impact factor: 11.205

10.  Role of pyridoxal 5'-phosphate in glycogen phosphorylase. I. Synthesis of 3'-O-methylpyridoxal 5'-phosphate N-oxide and pyridoxal 5'-phosphate monomethyl ester and the conversion of the N-oxide to pyridoxal 5'-phosphate by apophosphorylase b from rabbit skeletal muscle.

Authors:  T Pfeuffer; J Ehrlich; E Helmreich
Journal:  Biochemistry       Date:  1972-05-23       Impact factor: 3.162

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  4 in total

1.  Calorimetric and spectroscopic studies of the thermotropic phase behavior of the n-saturated 1,2-diacylphosphatidylglycerols.

Authors:  Y P Zhang; R N Lewis; R N McElhaney
Journal:  Biophys J       Date:  1997-02       Impact factor: 4.033

2.  A solid-state 31P-NMR investigation of the allosteric transition in glycogen phosphorylase b.

Authors:  R Challoner; C A McDowell; W Stirtan; S G Withers
Journal:  Biophys J       Date:  1993-02       Impact factor: 4.033

3.  Calorimetric and spectroscopic studies of the polymorphic phase behavior of a homologous series of n-saturated 1,2-diacyl phosphatidylethanolamines.

Authors:  R N Lewis; R N McElhaney
Journal:  Biophys J       Date:  1993-04       Impact factor: 4.033

4.  Multiple phosphate positions in the catalytic site of glycogen phosphorylase: structure of the pyridoxal-5'-pyrophosphate coenzyme-substrate analog.

Authors:  S R Sprang; N B Madsen; S G Withers
Journal:  Protein Sci       Date:  1992-09       Impact factor: 6.725

  4 in total

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