Literature DB >> 6093038

'Interactive' recognition in EcoRI restriction enzyme-DNA complex.

R Kim, P Modrich, S H Kim.   

Abstract

A solution study of interaction between DNA and EcoRI restriction enzyme shows that there is a definite distortion of DNA in the specific recognition complexes but no measurable DNA distortion in the non-specific interaction.

Mesh：

Substances：

Year:  1984        PMID： 6093038      PMCID： PMC320161          DOI： 10.1093/nar/12.19.7285

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  10 in total

1.  DNA-ethidium reaction kinetics: demonstration of direct ligand transfer between DNA binding sites.

Authors:  J L Bresloff; D M Crothers
Journal:  J Mol Biol       Date:  1975-06-15       Impact factor: 5.469

2.  Four-stranded DNA structure and DNA base methylation in the mechanism of action of restriction endonucleases.

Authors:  A Stasiak; T Kłopotowski
Journal:  J Theor Biol       Date:  1979-09-07       Impact factor: 2.691

3.  Plasmids containing many tandem copies of a synthetic lactose operator.

Authors:  J R Sadler; M Tecklenburg; J L Betz
Journal:  Gene       Date:  1980-02       Impact factor: 3.688

4.  Nature of Col E 1 plasmid replication in Escherichia coli in the presence of the chloramphenicol.

Authors:  D B Clewell
Journal:  J Bacteriol       Date:  1972-05       Impact factor: 3.490

5.  DNA supercoiling and its effects on DNA structure and function.

Authors:  J C Wang; L J Peck; K Becherer
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1983

Review 6.  Studies on sequence recognition by type II restriction and modification enzymes.

Authors:  P Modrich
Journal:  CRC Crit Rev Biochem       Date:  1982

7.  Involvement of outside DNA sequences in the major kinetic path by which EcoRI endonuclease locates and leaves its recognition sequence.

Authors:  W E Jack; B J Terry; P Modrich
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

8.  Kinked DNA in crystalline complex with EcoRI endonuclease.

Authors:  C A Frederick; J Grable; M Melia; C Samudzi; L Jen-Jacobson; B C Wang; P Greene; H W Boyer; J M Rosenberg
Journal:  Nature       Date:  1984 May 24-30       Impact factor: 49.962

9.  Thermodynamic parameters governing interaction of EcoRI endonuclease with specific and nonspecific DNA sequences.

Authors:  B J Terry; W E Jack; R A Rubin; P Modrich
Journal:  J Biol Chem       Date:  1983-08-25       Impact factor: 5.157

10.  Tertiary structure for palindromic regions of DNA.

Authors:  V I Lim; A L Mazanov
Journal:  FEBS Lett       Date:  1978-04-01       Impact factor: 4.124
  10 in total
  9 in total

1.  Simultaneous determination of helical unwinding angles and intrinsic association constants in ligand-DNA complexes: the interaction between DNA and calichearubicin B.

Authors:  S M Zeman; K M Depew; S J Danishefsky; D M Crothers
Journal:  Proc Natl Acad Sci U S A       Date:  1998-04-14       Impact factor: 11.205

2.  Angle and locus of the bend induced by the msp I DNA methyltransferase in a sequence-specific complex with DNA.

Authors:  A K Dubey; S K Bhattacharya
Journal:  Nucleic Acids Res       Date:  1997-05-15       Impact factor: 16.971

Review 3.  Protein-induced DNA linking number change by sequence-specific DNA binding proteins and its biological effects.

Authors:  Fenfei Leng
Journal:  Biophys Rev       Date:  2016-06-10

Review 4.  Protein-induced DNA linking number change by sequence-specific DNA binding proteins and its biological effects.

Authors:  Fenfei Leng
Journal:  Biophys Rev       Date:  2016-11-14

5.  Site directed mutagenesis experiments suggest that Glu 111, Glu 144 and Arg 145 are essential for endonucleolytic activity of EcoRI.

Authors:  H Wolfes; J Alves; A Fliess; R Geiger; A Pingoud
Journal:  Nucleic Acids Res       Date:  1986-11-25       Impact factor: 16.971

6.  alpha-Putrescinylthymine and the sensitivity of bacteriophage phi W-14 DNA to restriction endonucleases.

Authors:  P B Miller; W W Wakarchuk; R A Warren
Journal:  Nucleic Acids Res       Date:  1985-04-11       Impact factor: 16.971

Review 7.  Nucleotide excision repair in Escherichia coli.

Authors:  B Van Houten
Journal:  Microbiol Rev       Date:  1990-03

8.  Protein-induced unwinding of DNA: measurement by gel electrophoresis of complexes with DNA minicircles. Application to restriction endonuclease EcoRI, catabolite gene activator protein and lac repressor.

Authors:  S Douc-Rasy; A Kolb; A Prunell
Journal:  Nucleic Acids Res       Date:  1989-07-11       Impact factor: 16.971

9.  Substrate-assisted catalysis in the cleavage of DNA by the EcoRI and EcoRV restriction enzymes.

Authors:  A Jeltsch; J Alves; H Wolfes; G Maass; A Pingoud
Journal:  Proc Natl Acad Sci U S A       Date:  1993-09-15       Impact factor: 11.205
  9 in total

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