Literature DB >> 6092825

Sequence analysis of the 17,166 base-pair EcoRI fragment C of B95-8 Epstein-Barr virus.

A T Bankier, P L Deininger, P J Farrell, B G Barrell.   

Abstract

In order to provide a framework for understanding the molecular biology of Epstein-Barr virus (EBV), we are determining the DNA sequence of the virus and studying the organization of genes on the viral genome. In this paper we report the DNA sequence of the EcoRI C fragment of the B95-8 strain of EBV. The large (approximately 13.6 kb) deletion in this strain has been located by comparison with the DNA sequence of EBV isolated from Raji cells. The sequence has been analysed for possible protein coding regions and transcriptional control sites. At least eight large open reading frames are found, some of them associated with canonical promoter and polyadenylation sequences. The sequences of some of the encoded proteins suggest that they are membrane proteins. It is known that antibodies to major membrane glycoproteins of EBV can neutralize infection in tissue culture. A possible relationship between some of the encoded proteins and the major membrane glycoproteins of the virus is discussed.

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Year:  1983        PMID: 6092825

Source DB:  PubMed          Journal:  Mol Biol Med        ISSN: 0735-1313


  11 in total

1.  A conserved open reading frame that overlaps the herpes simplex virus thymidine kinase gene is important for viral growth in cell culture.

Authors:  J G Jacobson; S L Martin; D M Coen
Journal:  J Virol       Date:  1989-04       Impact factor: 5.103

2.  Epstein-Barr virus genome may encode a protein showing significant amino acid and predicted secondary structure homology with glycoprotein B of herpes simplex virus 1.

Authors:  P E Pellett; M D Biggin; B Barrell; B Roizman
Journal:  J Virol       Date:  1985-12       Impact factor: 5.103

3.  Homology between DNA polymerases of poxviruses, herpesviruses, and adenoviruses: nucleotide sequence of the vaccinia virus DNA polymerase gene.

Authors:  P L Earl; E V Jones; B Moss
Journal:  Proc Natl Acad Sci U S A       Date:  1986-06       Impact factor: 11.205

4.  Role of the varicella-zoster virus gene product encoded by open reading frame 35 in viral replication in vitro and in differentiated human skin and T cells in vivo.

Authors:  Hideki Ito; Marvin H Sommer; Leigh Zerboni; Armin Baiker; Bunji Sato; Ruibin Liang; John Hay; William Ruyechan; Ann M Arvin
Journal:  J Virol       Date:  2005-04       Impact factor: 5.103

5.  Homology between two EBV early genes and HSV ribonucleotide reductase and 38K genes.

Authors:  T Gibson; P Stockwell; M Ginsburg; B Barrell
Journal:  Nucleic Acids Res       Date:  1984-06-25       Impact factor: 16.971

6.  Identification and mapping of polypeptides encoded by the P3HR-1 strain of Epstein-Barr virus.

Authors:  L K Cohen; S H Speck; B E Roberts; J L Strominger
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

7.  ATP-binding site of adenylate kinase: mechanistic implications of its homology with ras-encoded p21, F1-ATPase, and other nucleotide-binding proteins.

Authors:  D C Fry; S A Kuby; A S Mildvan
Journal:  Proc Natl Acad Sci U S A       Date:  1986-02       Impact factor: 11.205

8.  Multiple pathways for Epstein-Barr virus episome loss from nasopharyngeal carcinoma.

Authors:  Dirk P Dittmer; Chelsey J Hilscher; Margaret L Gulley; Eric V Yang; Min Chen; Ronald Glaser
Journal:  Int J Cancer       Date:  2008-11-01       Impact factor: 7.396

9.  EBV gene expression in an NPC-related tumour.

Authors:  M M Hitt; M J Allday; T Hara; L Karran; M D Jones; P Busson; T Tursz; I Ernberg; B E Griffin
Journal:  EMBO J       Date:  1989-09       Impact factor: 11.598

10.  Characterization of Epstein-Barr virus miRNAome in nasopharyngeal carcinoma by deep sequencing.

Authors:  Shu-Jen Chen; Gian-Hung Chen; Yi-Hsuan Chen; Cheng-Yuan Liu; Kai-Ping Chang; Yu-Sun Chang; Hua-Chien Chen
Journal:  PLoS One       Date:  2010-09-20       Impact factor: 3.240

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