Literature DB >> 5126467

pH-dependence and structure-activity relationships in the papain-catalysed hydrolysis of anilides.

G Lowe, Y Yuthavong.   

Abstract

The pH-dependence of the Michaelis-Menten parameters for the papain-catalysed hydrolysis of N-acetyl-l-phenylalanylglycine p-nitroanilide was determined. The equilibrium binding constant, K(s), is independent of pH between 3.7 and 9.3, whereas the acylation constant, k(+2), shows bell-shaped pH-dependence with apparent pK(a) values of 4.2 and 8.2. The effect of substituents in the leaving group on the acylation constant of the papain-catalysed hydrolysis of hippuryl anilides and N-acetyl-l-phenylalanylglycine anilides gives rise in both series to a Hammett rho value of -1.04. This indicates that the enzyme provides electrophilic, probably general-acid, catalysis, as well as the nucleophilic or general-base catalysis previously found. A mechanism involving a tetrahedral intermediate whose formation is general-base-catalysed and whose breakdown is general-acid-catalysed seems most likely. The similarity of the Hammett rho values appears to exclude facilitated proton transfer as a means through which the specificity of papain is expressed.

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Year:  1971        PMID: 5126467      PMCID: PMC1177120          DOI: 10.1042/bj1240117

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  13 in total

1.  Kinetic specificity in papain-catalysed hydrolyses.

Authors:  G Lowe; Y Yuthavong
Journal:  Biochem J       Date:  1971-08       Impact factor: 3.857

2.  The pH dependencies of individual rate constants in papain-catalyzed reactions.

Authors:  E C Lucas; A Williams
Journal:  Biochemistry       Date:  1969-12       Impact factor: 3.162

3.  On the mechanism of action at the acylation step of the alpha-chymotrypsin-catalyzed hydrolysis of anilides.

Authors:  L Parker; J H Wang
Journal:  J Biol Chem       Date:  1968-07-10       Impact factor: 5.157

4.  Identification of the rate-limiting step in the chymotrypsin-catalyzed hydrolysis of N-acetyl-L-tryptophanamide.

Authors:  M H O'Leary; M D Kluetz
Journal:  J Am Chem Soc       Date:  1970-10-07       Impact factor: 15.419

5.  Chymotrypsin-catalyzed phenyl ester hydrolysis. Evidence for electrophilic assistance on carbonyl oxygen.

Authors:  A Williams
Journal:  Biochemistry       Date:  1970-08-18       Impact factor: 3.162

6.  Chymotrypsin catalysis. Evidence for a new intermediate.

Authors:  M Caplow
Journal:  J Am Chem Soc       Date:  1969-06-18       Impact factor: 15.419

7.  An electrophilic mechanism in the chymotrypsin-catalyzed hydrolysis of anilide substrates.

Authors:  T Inagami; S S York; A Patchornik
Journal:  J Am Chem Soc       Date:  1965-01-05       Impact factor: 15.419

8.  Pretransition-state protonation and the rate of chymotrypsin catalysis.

Authors:  J H Wang; L Parker
Journal:  Proc Natl Acad Sci U S A       Date:  1967-12       Impact factor: 11.205

9.  A kinetic analysis of the papain-catalyzed hydrolysis of alpha-N-benzoyl-L-citrulline methyl ester.

Authors:  W Cohen; P H Petra
Journal:  Biochemistry       Date:  1967-04       Impact factor: 3.162

10.  Kinetics of papain-catalyzed hydrolyses of neutral substrates.

Authors:  D C Williams; J R Whitaker
Journal:  Biochemistry       Date:  1967-12       Impact factor: 3.162

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  13 in total

1.  Variation in the P2-S2 stereochemical selectivity towards the enantiomeric N-acetylphenylalanylglycine 4-nitroanilides among the cysteine proteinases papain, ficin and actinidin.

Authors:  M Patel; I S Kayani; G W Mellor; S Sreedharan; W Templeton; E W Thomas; M Thomas; K Brocklehurst
Journal:  Biochem J       Date:  1992-01-15       Impact factor: 3.857

2.  The electrostatic fields in the active-site clefts of actinidin and papain.

Authors:  R W Pickersgill; P W Goodenough; I G Sumner; M E Collins
Journal:  Biochem J       Date:  1988-08-15       Impact factor: 3.857

3.  The interplay of electrostatic and binding interactions determining active centre chemistry and catalytic activity in actinidin and papain.

Authors:  K Brocklehurst; M O'Driscoll; D Kowlessur; I R Phillips; W Templeton; E W Thomas; C M Topham; C W Wharton
Journal:  Biochem J       Date:  1989-01-01       Impact factor: 3.857

4.  Chymopapain A. Purification and investigation by covalent chromatography and characterization by two-protonic-state reactivity-probe kinetics, steady-state kinetics and resonance Raman spectroscopy of some dithioacyl derivatives.

Authors:  B S Baines; K Brocklehurst; P R Carey; M Jarvis; E Salih; A C Storer
Journal:  Biochem J       Date:  1986-01-01       Impact factor: 3.857

5.  The specificity of the S1' subsite of papain.

Authors:  M R Alecio; M L Dann; G Lowe
Journal:  Biochem J       Date:  1974-08       Impact factor: 3.857

6.  The structure and mechanism of stem bromelain. Evaluation of the homogeneity of purified stem bromelain, determination of the molecular weight and kinetic analysis of the bromelain-catalysed hydrolysis of N-benzyloxycarbonyl-L-phenylalanyl-L-serine methyl ester.

Authors:  C W Wharton
Journal:  Biochem J       Date:  1974-12       Impact factor: 3.857

7.  Investigation of the active site of papain with fluorescent probes.

Authors:  G Allen; G Lowe
Journal:  Biochem J       Date:  1973-08       Impact factor: 3.857

8.  Reaction pathway and free energy profile for papain-catalyzed hydrolysis of N-acetyl-Phe-Gly 4-nitroanilide.

Authors:  Donghui Wei; Xiaoqin Huang; Junjun Liu; Mingsheng Tang; Chang-Guo Zhan
Journal:  Biochemistry       Date:  2013-07-17       Impact factor: 3.162

9.  Substrate-derived two-protonic-state electrophiles as sensitive kinetic specificity probes for cysteine proteinases. Activation of 2-pyridyl disulphides by hydrogen-bonding.

Authors:  K Brocklehurst; D Kowlessur; M O'Driscoll; G Patel; S Quenby; E Salih; W Templeton; E W Thomas; F Willenbrock
Journal:  Biochem J       Date:  1987-05-15       Impact factor: 3.857

10.  Trimethyl lock: a stable chromogenic substrate for esterases.

Authors:  Michael N Levine; Luke D Lavis; Ronald T Raines
Journal:  Molecules       Date:  2008-01-31       Impact factor: 4.411

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