Literature DB >> 4982840

Purification and properties of D-4-deoxy-5-oxoglucarate hydro-lyase (decarboxylating).

R Jeffcoat, H Hassall, S Dagley.   

Abstract

1. An enzyme extracted from Pseudomonas acidovorans was purified and shown to catalyse the simultaneous dehydration and decarboxylation of d-4-deoxy-5-oxoglucarate. It is proposed to name the enzyme d-4-deoxy-5-oxoglucarate hydro-lyase (decarboxylating), trivial name ;deoxyoxoglucarate dehydratase'. 2. No added cofactors were required, and the enzyme was inactivated when incubated with its substrate in the presence of sodium borohydride. Under these conditions the substrate and enzyme appeared to be bound covalently. 3. The action of the enzyme is readily explained if it is assumed that d-4-deoxy-5-oxoglucarate forms a Schiff base with a lysine residue in the enzyme.

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Year:  1969        PMID: 4982840      PMCID: PMC1185240          DOI: 10.1042/bj1150977

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  15 in total

1.  Tartaric acid metabolism. VI. Crystalline oxaloglycolate reductive decarboxylase.

Authors:  L D Kohn; W B Jakoby
Journal:  J Biol Chem       Date:  1968-05-25       Impact factor: 5.157

Review 2.  The mechanism of action of aldolases.

Authors:  D E Morse; B L Horecker
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1968

3.  A convenient method of preparing polyacrylamide gels for liquid scintillation spectrometry.

Authors:  P V Tishler; C J Epstein
Journal:  Anal Biochem       Date:  1968-01       Impact factor: 3.365

4.  The metabolism of protocatechuate by Pseudomonas testosteroni.

Authors:  S Dagley; P J Geary; J M Wood
Journal:  Biochem J       Date:  1968-10       Impact factor: 3.857

5.  The role of lysine residues in the activity of 2-keto-3-deoxy-6-phosphogluconate aldolase.

Authors:  J M Ingram; W A Wood
Journal:  J Biol Chem       Date:  1965-11       Impact factor: 5.157

6.  Studies on the mechanism of action of 2-keto-3-deoxy-L-arabonate dehydratase. The participation of an enzyme-substrate Schiff base in a dehydration.

Authors:  D Portsmouth; A C Stoolmiller; R H Abeles
Journal:  J Biol Chem       Date:  1967-06-10       Impact factor: 5.157

7.  The mechanism of 2-keto-3-deoxy-6-phosphogluconic aldolase. II. Studies of the partial reactions with substrate analogues.

Authors:  J M Ingram; W A Wood
Journal:  J Biol Chem       Date:  1966-07-25       Impact factor: 5.157

8.  Acetoacetate decarboxylase. Identification of lysine at the active site.

Authors:  S Warren; B Zerner; F H Westheimer
Journal:  Biochemistry       Date:  1966-03       Impact factor: 3.162

9.  D-glucarate catabolism by pseudomonadaceae and enterobacteriaceae.

Authors:  P W Trudgill; R Widdus
Journal:  Nature       Date:  1966-09-03       Impact factor: 49.962

10.  The metabolism of D-glucarate by Pseudomonas acidovorans.

Authors:  R Jeffcoat; H Hassall; S Dagley
Journal:  Biochem J       Date:  1969-12       Impact factor: 3.857

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  11 in total

1.  Studies on the subunit structure of 4-deoxy-5-oxoglucarate hydro-lyase (decarboxylating) from Pseudomonas acidovorans.

Authors:  R Jeffcoat
Journal:  Biochem J       Date:  1975-02       Impact factor: 3.857

2.  Purification, crystallization and preliminary X-ray diffraction analysis of a novel keto-deoxy-D-galactarate (KDG) dehydratase from Agrobacterium tumefaciens.

Authors:  Helena Taberman; Martina Andberg; Tarja Parkkinen; Peter Richard; Nina Hakulinen; Anu Koivula; Juha Rouvinen
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2013-12-24       Impact factor: 1.056

Review 3.  The metabolism of hydroxyproline.

Authors:  E Adams
Journal:  Mol Cell Biochem       Date:  1973-12-15       Impact factor: 3.396

4.  Studies on glucarate catabolism: the oxodeoxyglucarate aldolase activity of glucarate hydro-lyase from Pseudomonas acidovorans.

Authors:  R Jeffcoat
Journal:  Biochem J       Date:  1974-05       Impact factor: 3.857

5.  Metabolic function and properties of 4-hydroxyphenylacetic acid 1-hydroxylase from Pseudomonas acidovorans.

Authors:  W A Hareland; R L Crawford; P J Chapman; S Dagley
Journal:  J Bacteriol       Date:  1975-01       Impact factor: 3.490

6.  Characterization of a novel Agrobacterium tumefaciens galactarolactone cycloisomerase enzyme for direct conversion of D-galactarolactone to 3-deoxy-2-keto-L-threo-hexarate.

Authors:  Martina Andberg; Hannu Maaheimo; Harry Boer; Merja Penttilä; Anu Koivula; Peter Richard
Journal:  J Biol Chem       Date:  2012-04-05       Impact factor: 5.157

7.  New insights into the alternative D-glucarate degradation pathway.

Authors:  Asadollah Aghaie; Christophe Lechaplais; Peggy Sirven; Sabine Tricot; Marielle Besnard-Gonnet; Delphine Muselet; Véronique de Berardinis; Annett Kreimeyer; Gabor Gyapay; Marcel Salanoubat; Alain Perret
Journal:  J Biol Chem       Date:  2008-03-25       Impact factor: 5.157

8.  Catabolism of D-gluaric acid to alpha-ketoglutarate in Bacillus megaterium.

Authors:  B S Sharma; H J Blumenthal
Journal:  J Bacteriol       Date:  1973-12       Impact factor: 3.490

9.  Cloning, expression, purification, crystallization and preliminary X-ray diffraction studies of N-acetylneuraminate lyase from methicillin-resistant Staphylococcus aureus.

Authors:  Rachel A North; Sarah A Kessans; Sarah C Atkinson; Hironori Suzuki; Andrew J A Watson; Benjamin R Burgess; Lauren M Angley; André O Hudson; Arvind Varsani; Michael D W Griffin; Antony J Fairbanks; Renwick C J Dobson
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-02-27

10.  L-Hydroxyproline and d-Proline Catabolism in Sinorhizobium meliloti.

Authors:  Siyun Chen; Catharine E White; George C diCenzo; Ye Zhang; Peter J Stogios; Alexei Savchenko; Turlough M Finan
Journal:  J Bacteriol       Date:  2016-02-01       Impact factor: 3.490

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