Literature DB >> 4022769

A highly polymorphic region 3' to the human type II collagen gene.

N G Stoker, K S Cheah, J R Griffin, F M Pope, E Solomon.   

Abstract

We have characterised a highly polymorphic region 1.3kb downstream of the human Type II collagen gene. It consists of a highly AT-rich tandem repetitive region (minisatellite) approximately 650bp long. Two alleles had been observed previously, differing in size by approximately 300bp. When this region was cloned from four unrelated individuals carrying the larger allele, DNA sequence data identified three alleles, suggesting far higher polymorphism than was originally supposed. This minisatellite was shown to be present in a single copy in the human genome, and to have arisen after the divergence of Old and New World monkeys.

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Year:  1985        PMID: 4022769      PMCID: PMC321815          DOI: 10.1093/nar/13.13.4613

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  33 in total

1.  Exclusion of the alpha 1(II) cartilage collagen gene as the mutant locus in type IA osteogenesis imperfecta.

Authors:  B Sykes; R Smith; S Vipond; C Paterson; K Cheah; E Solomon
Journal:  J Med Genet       Date:  1985-06       Impact factor: 6.318

2.  Highly variable regions of DNA flank the human alpha globin genes.

Authors:  D R Higgs; S E Goodbourn; J S Wainscoat; J B Clegg; D J Weatherall
Journal:  Nucleic Acids Res       Date:  1981-09-11       Impact factor: 16.971

3.  The structure of the human zeta-globin gene and a closely linked, nearly identical pseudogene.

Authors:  N J Proudfoot; A Gil; T Maniatis
Journal:  Cell       Date:  1982-12       Impact factor: 41.582

4.  A Hind III restriction site polymorphism in the human collagen alpha 1 (I)-like gene on chromosome No. 7.

Authors:  A J Driesel; A M Schumacher; R A Flavell
Journal:  Hum Genet       Date:  1982       Impact factor: 4.132

5.  Isolation and characterization of a human collagen alpha 1(I)-like gene from a cosmid library.

Authors:  E H Weiss; K S Cheah; F G Grosveld; H H Dahl; E Solomon; R A Flavell
Journal:  Nucleic Acids Res       Date:  1982-03-25       Impact factor: 16.971

6.  Construction and partial characterization of two recombinant cDNA clones for procollagen from chicken cartilage.

Authors:  E Vuorio; L Sandell; D Kravis; V C Sheffield; T Vuorio; A Dorfman; W B Upholt
Journal:  Nucleic Acids Res       Date:  1982-02-25       Impact factor: 16.971

7.  Generation length and rates of hominoid molecular evolution.

Authors:  V M Sarich; J E Cronin
Journal:  Nature       Date:  1977-09-22       Impact factor: 49.962

8.  The highly polymorphic region near the human insulin gene is composed of simple tandemly repeating sequences.

Authors:  G I Bell; M J Selby; W J Rutter
Journal:  Nature       Date:  1982-01-07       Impact factor: 49.962

9.  Duplication/deletion polymorphism 5' - to the human beta globin gene.

Authors:  R A Spritz
Journal:  Nucleic Acids Res       Date:  1981-10-10       Impact factor: 16.971

10.  The construction of cosmid libraries which can be used to transform eukaryotic cells.

Authors:  F G Grosveld; T Lund; E J Murray; A L Mellor; H H Dahl; R A Flavell
Journal:  Nucleic Acids Res       Date:  1982-11-11       Impact factor: 16.971

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  35 in total

Review 1.  Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved "chromatin folding code".

Authors:  P Vogt
Journal:  Hum Genet       Date:  1990-03       Impact factor: 4.132

2.  A gene deletion ending within a complex array of repeated sequences 3' to the human beta-globin gene cluster.

Authors:  P S Henthorn; D L Mager; T H Huisman; O Smithies
Journal:  Proc Natl Acad Sci U S A       Date:  1986-07       Impact factor: 11.205

3.  Amplification of the COL2A1 3' variable region used for segregation analysis in a family with the Stickler syndrome.

Authors:  L Priestley; D Kumar; B Sykes
Journal:  Hum Genet       Date:  1990-10       Impact factor: 4.132

4.  Application of DNA fingerprints for cell-line individualization.

Authors:  D A Gilbert; Y A Reid; M H Gail; D Pee; C White; R J Hay; S J O'Brien
Journal:  Am J Hum Genet       Date:  1990-09       Impact factor: 11.025

5.  Human collagen, type II, alpha 1, (COL2A1) gene: VNTR polymorphism detected by gene amplification.

Authors:  S Wu; S Seino; G I Bell
Journal:  Nucleic Acids Res       Date:  1990-05-25       Impact factor: 16.971

6.  VNTR and microsatellite polymorphisms within the subtelomeric region of 7q.

Authors:  A V Hing; C Helms; H Donis-Keller
Journal:  Am J Hum Genet       Date:  1993-08       Impact factor: 11.025

7.  Structural and segregation analysis of the type II collagen gene (COL2A1) in some heritable chondrodysplasias.

Authors:  P Wordsworth; D Ogilvie; L Priestley; R Smith; R Wynne-Davies; B Sykes
Journal:  J Med Genet       Date:  1988-08       Impact factor: 6.318

8.  A cluster of highly polymorphic dinucleotide repeats in intron 17b of the cystic fibrosis transmembrane conductance regulator (CFTR) gene.

Authors:  J Zielenski; D Markiewicz; F Rininsland; J Rommens; L C Tsui
Journal:  Am J Hum Genet       Date:  1991-12       Impact factor: 11.025

9.  A VNTR immediately adjacent to the human pseudoautosomal telomere.

Authors:  C F Inglehearn; H J Cooke
Journal:  Nucleic Acids Res       Date:  1990-02-11       Impact factor: 16.971

10.  Simple human DNA-repeats associated with genomic hypervariability, flanking the genomic retroposons and similar to retroviral sites.

Authors:  E I Rogaev
Journal:  Nucleic Acids Res       Date:  1990-04-11       Impact factor: 16.971

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