Literature DB >> 4009726

Haemoglobin: the surface buried between the alpha 1 beta 1 and alpha 2 beta 2 dimers in the deoxy and oxy structures.

A M Lesk, J Janin, S Wodak, C Chothia.   

Abstract

Using the newly available refined co-ordinates of deoxy and oxyhaemoglobin, we have re-examined and compared the interfaces between the dimers alpha 1 beta 1 and alpha 2 beta 2. The most extensive monomer-monomer contacts are between alpha 1 and beta 2, and, symmetrically, alpha 2 and beta 1. In oxyhaemoglobin these interfaces bury 700 A2 less protein surface than in deoxyhaemoglobin. The alpha 1 alpha 2 interface involves similar salt bridges in both forms, but in oxyhaemoglobin buries 240 A2 more surface than in deoxyhaemoglobin. There is a loosely packed beta 1 beta 2 interface burying 320 A2 of surface in oxyhaemoglobin; there is no beta 1 beta 2 interface in deoxyhaemoglobin. The greater stability of the deoxy form, in the absence of ligands, can be attributed to a combination of hydrophobic, van der Waals' and electrostatic interactions.

Entities:  

Mesh:

Substances:

Year:  1985        PMID: 4009726     DOI: 10.1016/0022-2836(85)90219-0

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  7 in total

1.  Estimating hydration changes upon biomolecular reactions from osmotic stress, high pressure, and preferential hydration experiments.

Authors:  Seishi Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-19       Impact factor: 11.205

2.  Identification of the intermediate allosteric species in human hemoglobin reveals a molecular code for cooperative switching.

Authors:  M A Daugherty; M A Shea; J A Johnson; V J LiCata; G J Turner; G K Ackers
Journal:  Proc Natl Acad Sci U S A       Date:  1991-02-15       Impact factor: 11.205

3.  Heterotropic effects of chloride on the ligation microstates of hemoglobin at constant water activity.

Authors:  Y Huang; M L Koestner; G K Ackers
Journal:  Biophys J       Date:  1996-10       Impact factor: 4.033

4.  Free energy of burying hydrophobic residues in the interface between protein subunits.

Authors:  B Vallone; A E Miele; P Vecchini; E Chiancone; M Brunori
Journal:  Proc Natl Acad Sci U S A       Date:  1998-05-26       Impact factor: 11.205

5.  The effect of water on the rate of conformational change in protein allostery.

Authors:  R A Goldbeck; S J Paquette; D S Kliger
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

6.  Site-specific semisynthetic variant of human hemoglobin.

Authors:  S A Hefta; S B Lyle; M R Busch; D E Harris; J B Matthew; F R Gurd
Journal:  Proc Natl Acad Sci U S A       Date:  1988-02       Impact factor: 11.205

7.  Valid molecular dynamics simulations of human hemoglobin require a surprisingly large box size.

Authors:  Krystel El Hage; Florent Hédin; Prashant K Gupta; Markus Meuwly; Martin Karplus
Journal:  Elife       Date:  2018-07-12       Impact factor: 8.140

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.