Literature DB >> 4006876

Dynamic properties of the backbone of an integral membrane polypeptide measured by 2H-NMR.

K P Pauls, A L MacKay, O Söderman, M Bloom, A K Tanjea, R S Hodges.   

Abstract

The 2H-NMR spectrum of the exchangeable hydrogens of the synthetic amphiphilic polypeptide, lys2-gly-leu24-lys2-ala-amide, was measured for the solid peptide at room temperature and, as a function of temperature, for the peptide incorporated into hydrated dipalmitoylphosphatidylcholine (DPPC) bilayers. This study is a prototype of a similar class of experiments which can be carried out on integral membrane proteins to characterize, quantitatively, the dynamic properties of integral membrane proteins. At temperatures below the DPPC gel-liquid crystalline phase transition, the 2H NMR spectrum was very similar to that of the solid peptide indicating that the peptide was immobilized in the lipid bilayer on the time scale (approximately equal to 10(-5) s) of the 2H-NMR measurements. The 2H-NMR spectrum above the phase transition corresponded to that expected from a peptide in the alpha-helical conformation reorienting rapidly about the symmetry axis of the alpha-helix. Measurements of the quadrupolar echo relaxation time, T2e, gave a quantitative measure of the correlation time, tau c, for this motion. The value of tau c decreased rapidly with increasing temperature as the fraction of DPPC molecules in the liquid crystalline phase increased, reaching a value of 2 X 10(-7) s above the phase transition. The observation of a characteristic minimum in T2e as the temperature was raised provided a definitive, quantitative interpretation of the T2e measurements. Using the known geometry of the peptide and the theory of uniaxial rotational diffusion, a value of eta = 1.1 poise was obtained for the effective viscosity of the membrane in close agreement with values obtained previously from transient linear dichroism measurements.

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Year:  1985        PMID: 4006876     DOI: 10.1007/bf00254089

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  18 in total

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Authors:  J Seelig
Journal:  Q Rev Biophys       Date:  1977-08       Impact factor: 5.318

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Journal:  Biochim Biophys Acta       Date:  1979-12-20

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Authors:  T Blundell; D Barlow; N Borkakoti; J Thornton
Journal:  Nature       Date:  1983 Nov 17-23       Impact factor: 49.962

4.  Lateral and rotational diffusion of bacteriorhodopsin in lipid bilayers: experimental test of the Saffman-Delbrück equations.

Authors:  R Peters; R J Cherry
Journal:  Proc Natl Acad Sci U S A       Date:  1982-07       Impact factor: 11.205

Review 5.  Rhodopsin and bacteriorhodopsin: structure-function relationships.

Authors: 
Journal:  FEBS Lett       Date:  1982-11-08       Impact factor: 4.124

6.  Lipid conformation in model membranes and biological membranes.

Authors:  J Seelig; A Seelig
Journal:  Q Rev Biophys       Date:  1980-02       Impact factor: 5.318

7.  Protein dynamics by solid-state nuclear magnetic resonance spectroscopy. Peptide backbone of the coat protein in fd bacteriophage.

Authors:  T A Cross; S J Opella
Journal:  J Mol Biol       Date:  1982-08-15       Impact factor: 5.469

8.  Characterization of the mobility of various chemical groups in the purple membrane of Halobacterium halobium by 13C, 31P and 2H solid state NMR.

Authors:  K H Spohn; R Kimmich
Journal:  Biochem Biophys Res Commun       Date:  1983-07-29       Impact factor: 3.575

9.  First observation of amino acid side chain dynamics in membrane proteins using high field deuterium nuclear magnetic resonance spectroscopy.

Authors:  R A Kinsey; A Kintanar; M D Tsai; R L Smith; N Janes; E Oldfield
Journal:  J Biol Chem       Date:  1981-05-10       Impact factor: 5.157

Review 10.  The dynamics of membrane structure.

Authors:  P J Quinn; D Chapman
Journal:  CRC Crit Rev Biochem       Date:  1980
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  30 in total

1.  The EGF receptor transmembrane domain: peptide-peptide interactions in fluid bilayer membranes.

Authors:  M R Morrow; C W Grant
Journal:  Biophys J       Date:  2000-10       Impact factor: 4.033

2.  Organization of model helical peptides in lipid bilayers: insight into the behavior of single-span protein transmembrane domains.

Authors:  Simon Sharpe; Kathryn R Barber; Chris W M Grant; David Goodyear; Michael R Morrow
Journal:  Biophys J       Date:  2002-07       Impact factor: 4.033

3.  Orientation and dynamics of synthetic transbilayer polypeptides containing GpATM dimerization motifs.

Authors:  Mark C McDonald; Valerie Booth; Michael R Morrow
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

4.  Fluctuations, exchange processes, and water diffusion in aqueous protein systems: A study of bovine serum albumin by diverse NMR techniques.

Authors:  R Kimmich; T Gneiting; K Kotitschke; G Schnur
Journal:  Biophys J       Date:  1990-11       Impact factor: 4.033

5.  Structure and dynamics of an amphiphilic peptide in a lipid bilayer: a molecular dynamics study.

Authors:  K Belohorcová; J H Davis; T B Woolf; B Roux
Journal:  Biophys J       Date:  1997-12       Impact factor: 4.033

Review 6.  Gramicidin A--phospholipid model systems.

Authors:  B Cornell
Journal:  J Bioenerg Biomembr       Date:  1987-12       Impact factor: 2.945

7.  Interaction of toposome from sea-urchin yolk granules with dimyristoyl phosphatidylserine model membranes: a 2H-NMR study.

Authors:  Michael Hayley; Jason Emberley; Philip J Davis; Michael R Morrow; John J Robinson
Journal:  Biophys J       Date:  2006-09-29       Impact factor: 4.033

8.  Molecular dynamics and (2)H-NMR study of the influence of an amphiphilic peptide on membrane order and dynamics.

Authors:  K Belohorcová; J Qian; J H Davis
Journal:  Biophys J       Date:  2000-12       Impact factor: 4.033

9.  Analysis of 31P MAS NMR spectra and transversal relaxation of bacteriophage M13 and tobacco mosaic virus.

Authors:  P C Magusin; M A Hemminga
Journal:  Biophys J       Date:  1994-04       Impact factor: 4.033

10.  Interaction of a peptide model of a hydrophobic transmembrane alpha-helical segment of a membrane protein with phosphatidylethanolamine bilayers: differential scanning calorimetric and Fourier transform infrared spectroscopic studies.

Authors:  Y P Zhang; R N Lewis; R S Hodges; R N McElhaney
Journal:  Biophys J       Date:  1995-03       Impact factor: 4.033

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