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Literature DB >> 3960722

The rDNA of C. elegans: sequence and structure.

Abstract

We have sequenced one complete rDNA tandem repeat from the nematode C. elegans. By comparative analysis we derive secondary structures for the 18s, 5.8s, and 26s rRNA molecules, and comment on other important features of the sequence. We also present the sequence of a junction between the rDNA and non-ribosomal DNA. Finally, we use our data to quantify the evolutionary relationships among several organisms currently studied in developmental biology.

Entities: Species

Mesh：

Substances：

Year: 1986 PMID： 3960722 PMCID： PMC339662 DOI： 10.1093/nar/14.5.2345

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

56 in total

1. Evolution of repeated DNA sequences by unequal crossover.

Authors: G P Smith
Journal: Science Date: 1976-02-13 Impact factor: 47.728

2. Insertion of a genetic marker into the ribosomal DNA of yeast.

Authors: J W Szostak; R Wu
Journal: Plasmid Date: 1979-10 Impact factor: 3.466

3. The DNA of Caenorhabditis elegans.

Authors: J E Sulston; S Brenner
Journal: Genetics Date: 1974-05 Impact factor: 4.562

4. The nucleotide sequence of 8 S RNA bound to preribosomal RNA of Novikoff hepatoma. The 5'-end of 8 S RNA is 5.8 S RNA.

Authors: R Reddy; L I Rothblum; C S Subrahmanyam; M H Liu; D Henning; B Cassidy; H Busch
Journal: J Biol Chem Date: 1983-01-10 Impact factor: 5.157

5. Sequence and secondary structure of mouse 28S rRNA 5'terminal domain. Organisation of the 5.8S-28S rRNA complex.

Authors: B Michot; J P Bachellerie; F Raynal
Journal: Nucleic Acids Res Date: 1982-09-11 Impact factor: 16.971

6. Automation of the computer handling of gel reading data produced by the shotgun method of DNA sequencing.

Authors: R Staden
Journal: Nucleic Acids Res Date: 1982-08-11 Impact factor: 16.971

7. Unequal crossing over in the ribosomal DNA of Saccharomyces cerevisiae.

Authors: J W Szostak; R Wu
Journal: Nature Date: 1980-04-03 Impact factor: 49.962

8. Unequal meiotic recombination within tandem arrays of yeast ribosomal DNA genes.

Authors: T D Petes
Journal: Cell Date: 1980-03 Impact factor: 41.582

9. Cloning of influenza cDNA ino M13: the sequence of the RNA segment encoding the A/PR/8/34 matrix protein.

Authors: G Winter; S Fields
Journal: Nucleic Acids Res Date: 1980-05-10 Impact factor: 16.971

10. DNA sequencing with chain-terminating inhibitors.

Authors: F Sanger; S Nicklen; A R Coulson
Journal: Proc Natl Acad Sci U S A Date: 1977-12 Impact factor: 11.205

61 in total

1. Molecular variation of Bothriocephalus acheilognathi Yamaguti, 1934 (Cestoda: Pseudophyllidea) in different fish host species based on ITS rDNA sequences.

Authors: H Y Luo; P Nie; Y A Zhang; G T Wang; W J Yao
Journal: Syst Parasitol Date: 2002-07 Impact factor: 1.431

2. A compilation of large subunit (23S- and 23S-like) ribosomal RNA structures.

Authors: R R Gutell; M N Schnare; M W Gray
Journal: Nucleic Acids Res Date: 1992-05-11 Impact factor: 16.971

3. rRNA genes from the lower chordate Herdmania momus: structural similarity with higher eukaryotes.

Authors: B M Degnan; J Yan; C J Hawkins; M F Lavin
Journal: Nucleic Acids Res Date: 1990-12-11 Impact factor: 16.971

4. Secondary structure models of D2-D3 expansion segments of 28S rRNA for Hoplolaiminae species.

Authors: Bae C H; R T Robbins; A L Szalanski
Journal: J Nematol Date: 2010-09 Impact factor: 1.402

Review 5. Compilation of small ribosomal subunit RNA sequences.

Authors: J M Neefs; Y Van de Peer; P De Rijk; A Goris; R De Wachter
Journal: Nucleic Acids Res Date: 1991-04-25 Impact factor: 16.971

Review 6. An overview of the secondary structure of the V4 region of eukaryotic small-subunit ribosomal RNA.

Authors: D L Nickrent; M L Sargent
Journal: Nucleic Acids Res Date: 1991-01-25 Impact factor: 16.971

7. The two main rDNA size classes of Ascaris lumbricoides: comparison of transcription termination and spacer organization.

Authors: E Müller; H Neuhaus; H Tobler; F Müller
Journal: Nucleic Acids Res Date: 1992-06-25 Impact factor: 16.971