Literature DB >> 3908096

Characteristic views of E. coli and B. stearothermophilus 30S ribosomal subunits in the electron microscope.

M van Heel, M Stöffler-Meilicke.   

Abstract

Large sets of electron microscopic images of the 30S ribosomal subunits of Bacillus stearothermophilus (914 molecules) and Escherichia coli (422 molecules) were analysed with image processing techniques. Using computer alignment and a new multivariate statistical classification scheme, three predominant views of the subunit were found for both species. These views, which together account for approximately 90% of the population of images, were determined to a reproducible resolution of up to 1.7 nm, thus elucidating many new structural details. The angular spread of the molecular orientations around the three main stable positions is remarkably small (less than 8 degrees). Some of the current models for the small ribosomal subunit are incompatible with our new results.

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Year:  1985        PMID: 3908096      PMCID: PMC554515          DOI: 10.1002/j.1460-2075.1985.tb03944.x

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  23 in total

1.  Molecular structure determination by electron microscopy of unstained crystalline specimens.

Authors:  P N Unwin; R Henderson
Journal:  J Mol Biol       Date:  1975-05-25       Impact factor: 5.469

2.  Motif detection in quantum noise-limited electron micrographs by cross-correlation.

Authors:  W O Saxton; J Frank
Journal:  Ultramicroscopy       Date:  1977-04       Impact factor: 2.689

3.  Structural dynamics of bacterial ribosomes. I. Characterization of vacant couples and their relation to complexed ribosomes.

Authors:  M Noll; B Hapke; M H Schreier; H Noll
Journal:  J Mol Biol       Date:  1973-04-05       Impact factor: 5.469

4.  Location of proteins S5, S13 and S14 on the surface of the 3oS ribosomal subunit from Escherichia coli as determined by immune electron microscopy.

Authors:  G W Tischendorf; H Zeichhardt; G Stöffler
Journal:  Mol Gen Genet       Date:  1974

5.  Architecture of the Escherichia coli ribosome as determined by immune electron microscopy.

Authors:  G W Tischendorf; H Zeichhardt; G Stöffler
Journal:  Proc Natl Acad Sci U S A       Date:  1975-12       Impact factor: 11.205

6.  Ribosome structure determined by electron microscopy of Escherichia coli small subunits, large subunits and monomeric ribosomes.

Authors:  J A Lake
Journal:  J Mol Biol       Date:  1976-07-25       Impact factor: 5.469

7.  Three-dimensional reconstruction of the 30 S ribosomal subunit from randomly oriented particles.

Authors:  A Verschoor; J Frank; M Radermacher; T Wagenknecht; M Boublik
Journal:  J Mol Biol       Date:  1984-09-25       Impact factor: 5.469

8.  Ribosomal proteins. Isolation of the proteins from 30S ribosomal subunits of Escherichia coli.

Authors:  I Hindennach; G Stöffler; H G Wittmann
Journal:  Eur J Biochem       Date:  1971-11-11

9.  Existence of only a single functional pool of adenosine triphosphate in human erythrocytes.

Authors:  E Beutler; E Guinto; W Kuhl; F Matsumoto
Journal:  Proc Natl Acad Sci U S A       Date:  1978-06       Impact factor: 11.205

10.  Reconstruction of glutamine synthetase using computer averaging.

Authors:  J Frank; W Goldfarb; D Eisenberg; T S Baker
Journal:  Ultramicroscopy       Date:  1978       Impact factor: 2.689

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  37 in total

1.  Identifying conformational states of macromolecules by eigen-analysis of resampled cryo-EM images.

Authors:  Pawel A Penczek; Marek Kimmel; Christian M T Spahn
Journal:  Structure       Date:  2011-11-09       Impact factor: 5.006

Review 2.  Single-particle cryo-electron microscopy of macromolecular complexes.

Authors:  Georgios Skiniotis; Daniel R Southworth
Journal:  Microscopy (Oxf)       Date:  2015-11-25       Impact factor: 1.571

3.  How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography.

Authors:  V Lim; C Venclovas; A Spirin; R Brimacombe; P Mitchell; F Müller
Journal:  Nucleic Acids Res       Date:  1992-06-11       Impact factor: 16.971

4.  Structural studies of human alpha 2-macroglobulin: concordance between projected views obtained by negative-stain and cryoelectron microscopy.

Authors:  J K Stoops; J P Schroeter; J P Bretaudiere; N H Olson; T S Baker; D K Strickland
Journal:  J Struct Biol       Date:  1991-04       Impact factor: 2.867

5.  Classification and 3D averaging with missing wedge correction in biological electron tomography.

Authors:  A Bartesaghi; P Sprechmann; J Liu; G Randall; G Sapiro; S Subramaniam
Journal:  J Struct Biol       Date:  2008-03-21       Impact factor: 2.867

6.  Intrinsic versus imposed curvature in cyclical oligomers: the portal protein of bacteriophage SPP1.

Authors:  M van Heel; E V Orlova; P Dube; P Tavares
Journal:  EMBO J       Date:  1996-09-16       Impact factor: 11.598

7.  Single-particle cryo-EM-Improved ab initio 3D reconstruction with SIMPLE/PRIME.

Authors:  Cyril F Reboul; Michael Eager; Dominika Elmlund; Hans Elmlund
Journal:  Protein Sci       Date:  2017-09-06       Impact factor: 6.725

8.  Molecular architecture and mechanism of an icosahedral pyruvate dehydrogenase complex: a multifunctional catalytic machine.

Authors:  Jacqueline L S Milne; Dan Shi; Peter B Rosenthal; Joshua S Sunshine; Gonzalo J Domingo; Xiongwu Wu; Bernard R Brooks; Richard N Perham; Richard Henderson; Sriram Subramaniam
Journal:  EMBO J       Date:  2002-11-01       Impact factor: 11.598

9.  DNA translocation activity of the multifunctional replication protein ORF904 from the archaeal plasmid pRN1.

Authors:  Martin Sanchez; Markus Drechsler; Holger Stark; Georg Lipps
Journal:  Nucleic Acids Res       Date:  2009-09-17       Impact factor: 16.971

Review 10.  Molecular electron microscopy: state of the art and current challenges.

Authors:  Henning Stahlberg; Thomas Walz
Journal:  ACS Chem Biol       Date:  2008-05-16       Impact factor: 5.100

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