Literature DB >> 3889924

Two-codon insertion mutagenesis of plasmid genes by using single-stranded hexameric oligonucleotides.

F Barany.   

Abstract

An efficient method for introducing two codons into a cloned gene has been applied to studying functional regions of the pBR322-encoded tetracycline-resistance gene and beta-lactamase (ampicillin-resistance) gene. Single-stranded hexameric linkers are inserted into a preexisting cohesive end restriction site to create a new (six-base recognition) restriction site. Insertion mutations are enriched by using biochemical selection or are selected by using a kanamycin-resistance cassette (biological selection). Phenotypes of insertion mutations isolated in the tetracycline-resistance gene support the hypothesis that it is comprised of two domains connected by a central hinge. Mutations in the beta-lactamase gene are temperature sensitive and demonstrate altered sensitivity to various beta-lactams and inhibitors.

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Year:  1985        PMID: 3889924      PMCID: PMC397964          DOI: 10.1073/pnas.82.12.4202

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Construction of plasmids carrying the cI gene of bacteriophage lambda.

Authors:  K Backman; M Ptashne; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

2.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

3.  Mapping of closed circular DNAs by cleavage with restriction endonucleases and calibration by agarose gel electrophoresis.

Authors:  R C Parker; R M Watson; J Vinograd
Journal:  Proc Natl Acad Sci U S A       Date:  1977-03       Impact factor: 11.205

4.  A dye-buoyant-density method for the detection and isolation of closed circular duplex DNA: the closed circular DNA in HeLa cells.

Authors:  R Radloff; W Bauer; J Vinograd
Journal:  Proc Natl Acad Sci U S A       Date:  1967-05       Impact factor: 11.205

5.  Recombinant antibodies possessing novel effector functions.

Authors:  M S Neuberger; G T Williams; R O Fox
Journal:  Nature       Date:  1984 Dec 13-19       Impact factor: 49.962

6.  The reactivity of anti-peptide antibodies is a function of the atomic mobility of sites in a protein.

Authors:  J A Tainer; E D Getzoff; H Alexander; R A Houghten; A J Olson; R A Lerner; W A Hendrickson
Journal:  Nature       Date:  1984 Nov 8-14       Impact factor: 49.962

7.  In vitro insertional mutagenesis with a selectable DNA fragment.

Authors:  P Prentki; H M Krisch
Journal:  Gene       Date:  1984-09       Impact factor: 3.688

8.  Construction of mutants of Moloney murine leukemia virus by suppressor-linker insertional mutagenesis: positions of viable insertion mutations.

Authors:  L I Lobel; S P Goff
Journal:  Proc Natl Acad Sci U S A       Date:  1984-07       Impact factor: 11.205

9.  Identification of functional regions in the transforming protein of Fujinami sarcoma virus by in-phase insertion mutagenesis.

Authors:  J C Stone; T Atkinson; M Smith; T Pawson
Journal:  Cell       Date:  1984-06       Impact factor: 41.582

10.  Substituting an alpha-helix switches the sequence-specific DNA interactions of a repressor.

Authors:  R P Wharton; E L Brown; M Ptashne
Journal:  Cell       Date:  1984-09       Impact factor: 41.582

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  52 in total

1.  Correction of the DNA sequence of the regB gene of Rhodobacter capsulatus with implications for the membrane topology of the sensor kinase regB.

Authors:  W Chen; A Jäger; G Klug
Journal:  J Bacteriol       Date:  2000-02       Impact factor: 3.490

2.  In vitro mutagenesis of a xylanase from the extreme thermophile Caldocellum saccharolyticum.

Authors:  E Lüthi; K Reif; N B Jasmat; P L Bergquist
Journal:  Appl Microbiol Biotechnol       Date:  1992-01       Impact factor: 4.813

3.  Insertional mutagenesis of hydrophilic domains in the lactose permease of Escherichia coli.

Authors:  E McKenna; D Hardy; H R Kaback
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

4.  Internal deletions in the FhuA receptor of Escherichia coli K-12 define domains of ligand interactions.

Authors:  G Carmel; J W Coulton
Journal:  J Bacteriol       Date:  1991-07       Impact factor: 3.490

5.  RNA polymerase II subunit RPB3 is an essential component of the mRNA transcription apparatus.

Authors:  P Kolodziej; R A Young
Journal:  Mol Cell Biol       Date:  1989-12       Impact factor: 4.272

6.  Nucleotide sequence analysis of Tn4551: use of ermFS operon fusions to detect promoter activity in Bacteroides fragilis.

Authors:  C J Smith
Journal:  J Bacteriol       Date:  1987-10       Impact factor: 3.490

7.  Determination by systematic deletion of the amino acids essential for catalysis by ricin A chain.

Authors:  K N Morris; I G Wool
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-01       Impact factor: 11.205

8.  Active TEM-1 beta-lactamase mutants with random peptides inserted in three contiguous surface loops.

Authors:  Pascale Mathonet; Julie Deherve; Patrice Soumillion; Jacques Fastrez
Journal:  Protein Sci       Date:  2006-09-08       Impact factor: 6.725

9.  Thioredoxin is involved in oxygen-regulated formation of the photosynthetic apparatus of Rhodobacter sphaeroides.

Authors:  C Pasternak; K Haberzettl; G Klug
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

10.  Functional domains of the yeast STE12 protein, a pheromone-responsive transcriptional activator.

Authors:  C Kirkman-Correia; I L Stroke; S Fields
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

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