Literature DB >> 3889833

Promoter analysis of the phosphoenolpyruvate carboxylase gene of Escherichia coli.

K Izui, T Miwa, M Kajitani, N Fujita, H Sabe, A Ishihama, H Katsuki.   

Abstract

In order to find the promoter region of phosphoenolpyruvate carboxylase [EC 4.1.1.31] gene (ppc), in vitro transcription was performed using truncated DNA fragments as templates. Transcription mapping showed three promoters as candidates, but only one of them could be assigned to the promoter of ppc gene, considering the nucleotide sequence of its coding region (Fujita, N., Miwa, T., Ishijima, S., Izui, K. and Katsuki, H. (1984) J. Biochem. 95, 909-916). Nuclease S1 mapping showed that the in vivo and in vitro transcription initiation sites are identical and that the site lies 91 or 92 nucleotides upstream the translation initiation site. No alteration of the transcription initiation site was observed whether the cells were starved for an amino acid or grown on various carbon sources. The sequences of the -10 and -35 regions were fairly in accordance with the consensus sequences hitherto reported. Some features of the sequence around the promoter region were discussed.

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Year:  1985        PMID: 3889833      PMCID: PMC340974          DOI: 10.1093/nar/13.1.59

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

1.  Regulation of the amount and of the activity of phosphofructokinases and pyruvate kinases in Escherichia coli.

Authors:  D Kotlarz; H Garreau; H Buc
Journal:  Biochim Biophys Acta       Date:  1975-02-13

Review 2.  Stringent control in E. coli.

Authors:  J A Gallant
Journal:  Annu Rev Genet       Date:  1979       Impact factor: 16.830

3.  A simple procedure for resolution of Escherichia coli RNA polymerase holoenzyme from core polymerase.

Authors:  N Gonzalez; J Wiggs; M J Chamberlin
Journal:  Arch Biochem Biophys       Date:  1977-08       Impact factor: 4.013

4.  Activation of Escherichia coli phosphoenolpyruvate carboxylase by guanosine-5'-diphosphate-3'-diphosphate.

Authors:  M Taguchi; K Izui; H Katsuki
Journal:  FEBS Lett       Date:  1977-05-15       Impact factor: 4.124

5.  Isolation of "relaxed" mutants of Escherichia coli.

Authors:  N Fiil; J D Friesen
Journal:  J Bacteriol       Date:  1968-02       Impact factor: 3.490

6.  The primary structure of phosphoenolpyruvate carboxylase of Escherichia coli. Nucleotide sequence of the ppc gene and deduced amino acid sequence.

Authors:  N Fujita; T Miwa; S Ishijima; K Izui; H Katsuki
Journal:  J Biochem       Date:  1984-04       Impact factor: 3.387

7.  A method for the recovery of DNA from agarose gels.

Authors:  H F Tabak; R A Flavell
Journal:  Nucleic Acids Res       Date:  1978-07       Impact factor: 16.971

8.  Sequencing end-labeled DNA with base-specific chemical cleavages.

Authors:  A M Maxam; W Gilbert
Journal:  Methods Enzymol       Date:  1980       Impact factor: 1.600

9.  Heterogeneity of RNA polymerase in Escherichia coli. I. A new holoenzyme containing a new sigma factor.

Authors:  R Fukuda; Y Iwakura; A Ishihama
Journal:  J Mol Biol       Date:  1974-03       Impact factor: 5.469

10.  The 3'-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites.

Authors:  J Shine; L Dalgarno
Journal:  Proc Natl Acad Sci U S A       Date:  1974-04       Impact factor: 11.205

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  5 in total

1.  Expression of the CAM-form of phospho(enol)pyruvate carboxylase and nucleotide sequence of a full length cDNA from Mesembryanthemum crystallinum.

Authors:  J Rickers; J C Cushman; C B Michalowski; J M Schmitt; H J Bohnert
Journal:  Mol Gen Genet       Date:  1989-02

2.  Analysis of E. coli promoter sequences.

Authors:  C B Harley; R P Reynolds
Journal:  Nucleic Acids Res       Date:  1987-03-11       Impact factor: 16.971

3.  Compilation of E. coli mRNA promoter sequences.

Authors:  S Lisser; H Margalit
Journal:  Nucleic Acids Res       Date:  1993-04-11       Impact factor: 16.971

4.  Promoter knock-in: a novel rational method for the fine tuning of genes.

Authors:  Marjan De Mey; Jo Maertens; Sarah Boogmans; Wim K Soetaert; Erick J Vandamme; Raymond Cunin; Maria R Foulquié-Moreno
Journal:  BMC Biotechnol       Date:  2010-03-24       Impact factor: 2.563

5.  Promoter selectivity of the stationary-phase forms of Escherichia coli RNA polymerase and conversion in vitro of the S1 form enzyme into a log-phase enzyme-like form.

Authors:  M Ozaki; N Fujita; A Wada; A Ishihama
Journal:  Nucleic Acids Res       Date:  1992-01-25       Impact factor: 16.971

  5 in total

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