Literature DB >> 3856222

Isolation and characterization of an RNA ligase from HeLa cells.

K K Perkins, H Furneaux, J Hurwitz.   

Abstract

An RNA ligase has been purified from HeLa cells, which catalyzes the intra- and intermolecular ligation of linear RNA substrates possessing 5'-hydroxyl and 2',3'-cyclic phosphate termini in the presence of ATP or dATP. In this reaction, the 2',3'-cyclic phosphate is incorporated into a 3'-5'-phosphodiester bond, in agreement with the findings of Filipowicz et al. [Filipowicz, W., Konarska, M., Gross, H. J. & Shatkin, A. J. (1983) Nucleic Acids Res. 11, 1405-1418]. The activity of the purified enzyme is dependent on the addition of ATP or dATP, a divalent cation (Mg2+), and 5'-hydroxyl, 2',3'-cyclic phosphate-terminated RNA substrates. No ligation occurs with the substrates OH(Up)10G(3')p or OH(Up)10G(2')p or with 5'-phosphate, 2',3'-cyclic phosphate-terminated oligoribonucleotides.

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Year:  1985        PMID: 3856222      PMCID: PMC397110          DOI: 10.1073/pnas.82.3.684

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  23 in total

1.  Determination of recognition sites of T4 RNA ligase on the 3'-OH and 5' -P termini of polyribonucleotide chains.

Authors:  G Kaufmann; N R Kallenbach
Journal:  Nature       Date:  1975-04-03       Impact factor: 49.962

2.  Structure and processing of yeast precursor tRNAs containing intervening sequences.

Authors:  P Z O'Farrell; B Cordell; P Valenzuela; W J Rutter; H M Goodman
Journal:  Nature       Date:  1978-08-03       Impact factor: 49.962

3.  Transcription and processing of intervening sequences in yeast tRNA genes.

Authors:  G Knapp; J S Beckmann; P F Johnson; S A Fuhrman; J Abelson
Journal:  Cell       Date:  1978-06       Impact factor: 41.582

4.  Enzymatic catalysis and the transition state theory of reaction rates: transition state analogs.

Authors:  G E Lienhard; I I Secemski; K A Koehler; R N Lindquist
Journal:  Cold Spring Harb Symp Quant Biol       Date:  1972

5.  Intranuclear location of the tRNA splicing enzymes.

Authors:  E M De Robertis; P Black; K Nishikura
Journal:  Cell       Date:  1981-01       Impact factor: 41.582

6.  Formation of a 2'-phosphomonoester, 3',5'-phosphodiester linkage by a novel RNA ligase in wheat germ.

Authors:  M Konarska; W Filipowicz; H Domdey; H J Gross
Journal:  Nature       Date:  1981 Sep 10-16       Impact factor: 49.962

7.  Selective and accurate initiation of transcription at the Ad2 major late promotor in a soluble system dependent on purified RNA polymerase II and DNA.

Authors:  P A Weil; D S Luse; J Segall; R G Roeder
Journal:  Cell       Date:  1979-10       Impact factor: 41.582

8.  Enzymatic oligoribonucleotide synthesis with T4 RNA ligase.

Authors:  T E England; O C Uhlenbeck
Journal:  Biochemistry       Date:  1978-05-30       Impact factor: 3.162

9.  Yeast tRNA3Leu gene transcribed and spliced in a HeLa cell extract.

Authors:  D N Standring; A Venegas; W J Rutter
Journal:  Proc Natl Acad Sci U S A       Date:  1981-10       Impact factor: 11.205

10.  Isolation and characterization of RNA ligase from wheat germ.

Authors:  H Furneaux; L Pick; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1983-07       Impact factor: 11.205

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  17 in total

1.  A host-specific function is required for ligation of a wide variety of ribozyme-processed RNAs.

Authors:  C E Reid; D W Lazinski
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-04       Impact factor: 11.205

2.  Conserved mechanism of tRNA splicing in eukaryotes.

Authors:  M Zillmann; M A Gorovsky; E M Phizicky
Journal:  Mol Cell Biol       Date:  1991-11       Impact factor: 4.272

3.  Unambiguous identification of miRNA:target site interactions by different types of ligation reactions.

Authors:  Stefanie Grosswendt; Andrei Filipchyk; Mark Manzano; Filippos Klironomos; Marcel Schilling; Margareta Herzog; Eva Gottwein; Nikolaus Rajewsky
Journal:  Mol Cell       Date:  2014-05-22       Impact factor: 17.970

4.  RtcB is the RNA ligase component of an Escherichia coli RNA repair operon.

Authors:  Naoko Tanaka; Stewart Shuman
Journal:  J Biol Chem       Date:  2011-01-11       Impact factor: 5.157

5.  The human RNA 3'-terminal phosphate cyclase is a member of a new family of proteins conserved in Eucarya, Bacteria and Archaea.

Authors:  P Genschik; E Billy; M Swianiewicz; W Filipowicz
Journal:  EMBO J       Date:  1997-05-15       Impact factor: 11.598

6.  The two RNA ligases of the Trypanosoma brucei RNA editing complex: cloning the essential band IV gene and identifying the band V gene.

Authors:  L N Rusché; C E Huang; K J Piller; M Hemann; E Wirtz; B Sollner-Webb
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

7.  Archaeal 3'-phosphate RNA splicing ligase characterization identifies the missing component in tRNA maturation.

Authors:  Markus Englert; Kelly Sheppard; Aaron Aslanian; John R Yates; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-05       Impact factor: 11.205

8.  Junction phosphate is derived from the precursor in the tRNA spliced by the archaeon Haloferax volcanii cell extract.

Authors:  L Zofallova; Y Guo; R Gupta
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

9.  Structures of the noncanonical RNA ligase RtcB reveal the mechanism of histidine guanylylation.

Authors:  Kevin K Desai; Craig A Bingman; George N Phillips; Ronald T Raines
Journal:  Biochemistry       Date:  2013-04-05       Impact factor: 3.162

10.  Structural and mechanistic insights into guanylylation of RNA-splicing ligase RtcB joining RNA between 3'-terminal phosphate and 5'-OH.

Authors:  Markus Englert; Shuangluo Xia; Chiaki Okada; Akiyoshi Nakamura; Ved Tanavde; Min Yao; Soo Hyun Eom; William H Konigsberg; Dieter Söll; Jimin Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-09-04       Impact factor: 11.205

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