Literature DB >> 3827244

Dynamics of extracellular DNA in the marine environment.

J H Paul, W H Jeffrey, M F DeFlaun.   

Abstract

The production and turnover of dissolved DNA in subtropical estuarine and oligotrophic oceanic environments were investigated. Actively growing heterotrophic bacterioplankton (i.e., those capable of [3H]thymidine incorporation) were found to produce dissolved DNA, presumably through the processes of death and lysis, grazing by bacteriovores, and excretion. Production of dissolved DNA as determined by [3H]thymidine incorporation was less than or equal to 4% of the ambient dissolved DNA concentration per day. In turnover studies, the addition of [3H]DNA (Escherichia coli chromosomal) to seawater resulted in rapid hydrolysis and uptake or radioactivity by microbial populations. DNA was hydrolyzed by both cell-associated and extracellular nucleases, in both estuarine and offshore environments. Kinetic analysis performed for a eutrophic estuary indicated a turnover time for dissolved DNA as short as 6.5 h. Microautoradiographic studies of bacterial populations in Tampa Bay indicated that filamentous and attached bacteria took up most of the radioactivity from [3H]DNA. Dissolved DNA is therefore a dynamic component of the dissolved organic matter in the marine environment, and bacterioplankton play a key role in the cycling of this material.

Entities:  

Mesh:

Substances:

Year:  1987        PMID: 3827244      PMCID: PMC203621          DOI: 10.1128/aem.53.1.170-179.1987

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  13 in total

1.  A COMPARISON OF ESTIMATES OF MICHAELIS-MENTEN KINETIC CONSTANTS FROM VARIOUS LINEAR TRANSFORMATIONS.

Authors:  J E DOWD; D S RIGGS
Journal:  J Biol Chem       Date:  1965-02       Impact factor: 5.157

2.  Improved microautoradiographic method to determine individual microorganisms active in substrate uptake in natural waters.

Authors:  P S Tabor; R A Neihof
Journal:  Appl Environ Microbiol       Date:  1982-10       Impact factor: 4.792

3.  Degradation of dead microbial biomass in a marine sediment.

Authors:  J A Novitsky
Journal:  Appl Environ Microbiol       Date:  1986-09       Impact factor: 4.792

4.  Rate of bacterial mortality in aquatic environments.

Authors:  P Servais; G Billen; J V Rego
Journal:  Appl Environ Microbiol       Date:  1985-06       Impact factor: 4.792

5.  Fluorometric determination of DNA in aquatic microorganisms by use of hoechst 33258.

Authors:  J H Paul; B Myers
Journal:  Appl Environ Microbiol       Date:  1982-06       Impact factor: 4.792

Review 6.  The biology of natural transformation.

Authors:  G J Stewart; C A Carlson
Journal:  Annu Rev Microbiol       Date:  1986       Impact factor: 15.500

Review 7.  Genetic transformation.

Authors:  H O Smith; D B Danner; R A Deich
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

8.  Extracellular nuclease produced by a marine bacterium. II. Purification and properties of extracellular nuclease from a marine Vibrio sp.

Authors:  M Maeda; N Taga
Journal:  Can J Microbiol       Date:  1976-10       Impact factor: 2.419

9.  Isotope-dilution analysis of rate-limiting steps and pools affecting the incorporation of thymidine and deoxycytidine into cultured thymus cells.

Authors:  D A Sjostrom; D R Forsdyke
Journal:  Biochem J       Date:  1974-02       Impact factor: 3.857

10.  Validity of the tritiated thymidine method for estimating bacterial growth rates: measurement of isotope dilution during DNA synthesis.

Authors:  P C Pollard; D J Moriarty
Journal:  Appl Environ Microbiol       Date:  1984-12       Impact factor: 4.792

View more
  57 in total

1.  Pelagic-benthic coupling of nucleic acids in an abyssal location of the northeastern Atlantic Ocean.

Authors:  A Dell'Anno; M Fabiano; M L Mei; R Danovaro
Journal:  Appl Environ Microbiol       Date:  1999-10       Impact factor: 4.792

Review 2.  Virioplankton: viruses in aquatic ecosystems.

Authors:  K E Wommack; R R Colwell
Journal:  Microbiol Mol Biol Rev       Date:  2000-03       Impact factor: 11.056

3.  Degradation and turnover of extracellular DNA in marine sediments: ecological and methodological considerations.

Authors:  Antonio Dell'Anno; Cinzia Corinaldesi
Journal:  Appl Environ Microbiol       Date:  2004-07       Impact factor: 4.792

Review 4.  Genetic exchange in the environment.

Authors:  J P Coughter; G J Stewart
Journal:  Antonie Van Leeuwenhoek       Date:  1989       Impact factor: 2.271

5.  Extracellular DNA in single- and multiple-species unsaturated biofilms.

Authors:  R E Steinberger; P A Holden
Journal:  Appl Environ Microbiol       Date:  2005-09       Impact factor: 4.792

6.  Assessment of [h]thymidine incorporation into DNA as a method to determine bacterial productivity in stream bed sediments.

Authors:  L A Kaplan; T L Bott; J K Bielicki
Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

7.  Distribution of Viruses and Dissolved DNA along a Coastal Trophic Gradient in the Northern Adriatic Sea.

Authors:  M G Weinbauer; D Fuks; P Peduzzi
Journal:  Appl Environ Microbiol       Date:  1993-12       Impact factor: 4.792

8.  Gene transfer in marine water column and sediment microcosms by natural plasmid transformation.

Authors:  J H Paul; M E Frischer; J M Thurmond
Journal:  Appl Environ Microbiol       Date:  1991-05       Impact factor: 4.792

9.  Turnover of extracellular DNA in eutrophic and oligotrophic freshwater environments of southwest Florida.

Authors:  J H Paul; W H Jeffrey; A W David; M F Deflaun; L H Cazares
Journal:  Appl Environ Microbiol       Date:  1989-07       Impact factor: 4.792

Review 10.  Ancient and modern environmental DNA.

Authors:  Mikkel Winther Pedersen; Søren Overballe-Petersen; Luca Ermini; Clio Der Sarkissian; James Haile; Micaela Hellstrom; Johan Spens; Philip Francis Thomsen; Kristine Bohmann; Enrico Cappellini; Ida Bærholm Schnell; Nathan A Wales; Christian Carøe; Paula F Campos; Astrid M Z Schmidt; M Thomas P Gilbert; Anders J Hansen; Ludovic Orlando; Eske Willerslev
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2015-01-19       Impact factor: 6.237

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.