Literature DB >> 6517579

Validity of the tritiated thymidine method for estimating bacterial growth rates: measurement of isotope dilution during DNA synthesis.

P C Pollard, D J Moriarty.   

Abstract

The rate of tritiated thymidine incorporation into DNA was used to estimate bacterial growth rates in aquatic environments. To be accurate, the calculation of growth rates has to include a factor for the dilution of isotope before incorporation. The validity of an isotope dilution analysis to determine this factor was verified in experiments reported here with cultures of a marine bacterium growing in a chemostat. Growth rates calculated from data on chemostat dilution rates and cell density agreed well with rates calculated by tritiated thymidine incorporation into DNA and isotope dilution analysis. With sufficiently high concentrations of exogenous thymidine, de novo synthesis of deoxythymidine monophosphate was inhibited, thereby preventing the endogenous dilution of isotope. The thymidine technique was also shown to be useful for measuring growth rates of mixed suspensions of bacteria growing anaerobically. Thymidine was incorporated into the DNA of a range of marine pseudomonads that were investigated. Three species did not take up thymidine. The common marine cyanobacterium Synechococcus species did not incorporate thymidine into DNA.

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Year:  1984        PMID: 6517579      PMCID: PMC241689          DOI: 10.1128/aem.48.6.1076-1083.1984

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  27 in total

1.  Isotope-dilution studies of the effects of 5-fluorodeoxyuridine and hydroxyurea on the incorporation of deoxycytidine and thymidine by cultured thymus cells.

Authors:  F W Scott; D R Forsdyke
Journal:  Can J Biochem       Date:  1976-03

2.  Estimating Bacterioplankton Production by Measuring [H]thymidine Incorporation in a Eutrophic Swedish Lake.

Authors:  R T Bell; G M Ahlgren; I Ahlgren
Journal:  Appl Environ Microbiol       Date:  1983-06       Impact factor: 4.792

3.  The rate of deoxyribonucleic acid synthesis by cultured Chinese-hamster ovary cells. An application of isotope-dilution analysis.

Authors:  F W Scott; D R Forsdyke
Journal:  Biochem J       Date:  1978-03-15       Impact factor: 3.857

4.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

Review 5.  Microbial growth rates in nature.

Authors:  T D Brock
Journal:  Bacteriol Rev       Date:  1971-03

6.  Mechanism of regulation of deoxythymidine kinase of Escherichia coli. II. Effect of temperature on the enzyme activity and kinetics.

Authors:  N Iwatsuki; R Okazaki
Journal:  J Mol Biol       Date:  1967-10-14       Impact factor: 5.469

7.  Isotope-dilution analysis of the effects of deoxyguanosine and deoxyadenosine on the incorporation of thymidine and deoxycytidine by hydroxyurea-treated thymus cells.

Authors:  F W Scott; D R Forsdyke
Journal:  Biochem J       Date:  1980-09-15       Impact factor: 3.857

8.  In vitro polyoma DNA synthesis: characterization of a system from infected 3T3 cells.

Authors:  T Hunter; B Francke
Journal:  J Virol       Date:  1974-01       Impact factor: 5.103

9.  In vivo specific labeling of Chlamydomonas chloroplast DNA.

Authors:  D C Swinton; P C Hanawalt
Journal:  J Cell Biol       Date:  1972-09       Impact factor: 10.539

10.  Incorporation of thymidine in the cytoplasm of Amoeba proteus.

Authors:  W PLAUT; L A SAGAN
Journal:  J Biophys Biochem Cytol       Date:  1958-11-25
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  52 in total

1.  Bacterial diversity in relation to secondary production and succession on surfaces of the kelp Laminaria hyperborea.

Authors:  Mia M Bengtsson; Kjersti Sjøtun; Anders Lanzén; Lise Ovreås
Journal:  ISME J       Date:  2012-07-05       Impact factor: 10.302

2.  Activity measurements of planktonic microbial and microfouling communities in a eutrophic estuary.

Authors:  W H Jeffrey; J H Paul
Journal:  Appl Environ Microbiol       Date:  1986-01       Impact factor: 4.792

3.  Assessment of [h]thymidine incorporation into DNA as a method to determine bacterial productivity in stream bed sediments.

Authors:  L A Kaplan; T L Bott; J K Bielicki
Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

4.  Consequences of accounting for isotopic dilution in thymidine incorporation assays.

Authors:  T H Chrzanowski
Journal:  Appl Environ Microbiol       Date:  1988-07       Impact factor: 4.792

5.  [H]thymidine incorporation to estimate growth rates of anaerobic bacterial strains.

Authors:  A Winding
Journal:  Appl Environ Microbiol       Date:  1992-08       Impact factor: 4.792

6.  Measurement of Microbial Nucleic Acid Synthesis and Specific Growth Rate by PO(4) and [H]Adenine: Field Comparison.

Authors:  D M Karl; P Bossard
Journal:  Appl Environ Microbiol       Date:  1985-09       Impact factor: 4.792

7.  Seasonal and spatial distribution of extracellular enzymatic activities and microbial incorporation of dissolved organic substrates in marine sediments.

Authors:  L A Meyer-Reil
Journal:  Appl Environ Microbiol       Date:  1987-08       Impact factor: 4.792

8.  Effect of 5-fluoro-2'-deoxyuridine on [h]thymidine incorporation by bacterioplankton in the waters of southwest Florida.

Authors:  W H Jeffrey; J H Paul
Journal:  Appl Environ Microbiol       Date:  1988-02       Impact factor: 4.792

9.  Underestimation of DNA synthesis by [h]thymidine incorporation in marine bacteria.

Authors:  W H Jeffrey; J H Paul
Journal:  Appl Environ Microbiol       Date:  1988-12       Impact factor: 4.792

10.  Further Verification of the Isotope Dilution Approach for Estimating the Degree of Participation of [H]thymidine in DNA Synthesis in Studies of Aquatic Bacterial Production.

Authors:  R T Bell
Journal:  Appl Environ Microbiol       Date:  1986-11       Impact factor: 4.792

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