Literature DB >> 3808065

Molecular dynamics studied by analysis of the X-ray diffuse scattering from lysozyme crystals.

J Doucet, J P Benoit.   

Abstract

It is now well established that the biological activity of proteins is related not only to their mean molecular structure, but also to their intramolecular mobility. Nearly all techniques sensitive to dynamics have given evidence for intramolecular mobility in proteins: NMR, ESR, Raman spectroscopy, fluorescence quenching, Mössbauer spectroscopy, neutron scattering, measurements of elastic constants and hydrogen-deuterium exchange. The dynamics of proteins has also been approached by theoretical calculations. We report here investigations of the atomic and molecular displacements in hen egg-white lysozyme crystals using a new technique. This technique, based on the X-ray diffuse scattering analysis (scattering out of the Bragg reflections), can yield information on the atomic displacements, provided that they are correlated. Rigid-body molecular displacements, correlated along short rows of aligned molecules in two perpendicular directions, have been detected and analysed (mean square amplitude of the order of 5 X 10(-4) nm2). This technique can be also applied to the detection and analysis of intramolecular displacements.

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Year:  1987        PMID: 3808065     DOI: 10.1038/325643a0

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  24 in total

1.  The intermediate filament architecture as determined by X-ray diffraction modeling of hard alpha-keratin.

Authors:  Meriem Er Rafik; Jean Doucet; Fatma Briki
Journal:  Biophys J       Date:  2004-06       Impact factor: 4.033

2.  Normal modes of symmetric protein assemblies. Application to the tobacco mosaic virus protein disk.

Authors:  T Simonson; D Perahia
Journal:  Biophys J       Date:  1992-02       Impact factor: 4.033

3.  Rigid protein motion as a model for crystallographic temperature factors.

Authors:  J Kuriyan; W I Weis
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-01       Impact factor: 11.205

4.  Differences in the chemical and catalytic characteristics of two crystallographically 'identical' enzyme catalytic sites. Characterization of actinidin and papain by a combination of pH-dependent substrate catalysis kinetics and reactivity probe studies targeted on the catalytic-site thiol group and its immediate microenvironment.

Authors:  E Salih; J P Malthouse; D Kowlessur; M Jarvis; M O'Driscoll; K Brocklehurst
Journal:  Biochem J       Date:  1987-10-01       Impact factor: 3.857

5.  Diffuse x-ray scattering from tropomyosin crystals.

Authors:  S Chacko; G N Phillips
Journal:  Biophys J       Date:  1992-05       Impact factor: 4.033

6.  Molecular characteristics of recombinant human CD4 as deduced from polymorphic crystals.

Authors:  P D Kwong; S E Ryu; W A Hendrickson; R Axel; R M Sweet; G Folena-Wasserman; P Hensley; R W Sweet
Journal:  Proc Natl Acad Sci U S A       Date:  1990-08       Impact factor: 11.205

7.  Three-dimensional diffuse x-ray scattering from crystals of Staphylococcal nuclease.

Authors:  M E Wall; S E Ealick; S M Gruner
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-10       Impact factor: 11.205

8.  Conformational substates in enzyme mechanism: the 120 K structure of alpha-lytic protease at 1.5 A resolution.

Authors:  S D Rader; D A Agard
Journal:  Protein Sci       Date:  1997-07       Impact factor: 6.725

9.  Conformational dynamics of a crystalline protein from microsecond-scale molecular dynamics simulations and diffuse X-ray scattering.

Authors:  Michael E Wall; Andrew H Van Benschoten; Nicholas K Sauter; Paul D Adams; James S Fraser; Thomas C Terwilliger
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-01       Impact factor: 11.205

Review 10.  X-ray Scattering Studies of Protein Structural Dynamics.

Authors:  Steve P Meisburger; William C Thomas; Maxwell B Watkins; Nozomi Ando
Journal:  Chem Rev       Date:  2017-05-30       Impact factor: 60.622

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