Literature DB >> 3803926

Nucleotide sequence of the late region of Bacillus phage phi 29 completes the 19,285-bp sequence of phi 29 genome. Comparison with the homologous sequence of phage PZA.

C Vlcek, V Paces.   

Abstract

The 12,177-bp nucleotide (nt) sequence of the late region of Bacillus phage luminal diameter 29 genome was determined. This sequence completes the entire 19,285-bp sequence of phage luminal diameter 29 DNA. Eleven open reading frames were found in this region, and these were assigned to eleven late genes. Ribosome-binding sites and a potential transcriptional promoter and terminator are considered. The nt sequence was compared to the homologous region of the closely related phage PZA and tolerated variations at the nt and amino acid (aa) level were evaluated. The most frequent changes are silent nt substitutions in the third position of codons, but aa substitutions are also found.

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Year:  1986        PMID： 3803926     DOI： 10.1016/0378-1119(86)90406-3

Source DB:  PubMed          Journal:  Gene        ISSN： 0378-1119            Impact factor:   3.688


  25 in total

1.  Structure of the bacteriophage phi29 DNA packaging motor.

Authors:  A A Simpson; Y Tao; P G Leiman; M O Badasso; Y He; P J Jardine; N H Olson; M C Morais; S Grimes; D L Anderson; T S Baker; M G Rossmann
Journal:  Nature       Date:  2000-12-07       Impact factor: 49.962

2.  Phi29 family of phages.

Authors:  W J Meijer; J A Horcajadas; M Salas
Journal:  Microbiol Mol Biol Rev       Date:  2001-06       Impact factor: 11.056

Review 3.  Bacteriophage lysis: mechanism and regulation.

Authors:  R Young
Journal:  Microbiol Rev       Date:  1992-09

4.  Initiation of phi 29 DNA replication occurs at the second 3' nucleotide of the linear template: a sliding-back mechanism for protein-primed DNA replication.

Authors:  J Méndez; L Blanco; J A Esteban; A Bernad; M Salas
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-15       Impact factor: 11.205

5.  Structural changes of bacteriophage phi29 upon DNA packaging and release.

Authors:  Ye Xiang; Marc C Morais; Anthony J Battisti; Shelley Grimes; Paul J Jardine; Dwight L Anderson; Michael G Rossmann
Journal:  EMBO J       Date:  2006-10-19       Impact factor: 11.598

6.  The kalilo linear senescence-inducing plasmid of Neurospora is an invertron and encodes DNA and RNA polymerases.

Authors:  B S Chan; D A Court; P J Vierula; H Bertrand
Journal:  Curr Genet       Date:  1991-08       Impact factor: 3.886

7.  Functional domains in the bacteriophage phi 29 terminal protein for interaction with the phi 29 DNA polymerase and with DNA.

Authors:  A Zaballos; M Salas
Journal:  Nucleic Acids Res       Date:  1989-12-25       Impact factor: 16.971

8.  Characterization of the phage phi 29 protein p5 as a single-stranded DNA binding protein. Function in phi 29 DNA-protein p3 replication.

Authors:  G Martín; J M Lázaro; E Méndez; M Salas
Journal:  Nucleic Acids Res       Date:  1989-05-25       Impact factor: 16.971

9.  Purification in an active form of the phage phi 29 protein p4 that controls the viral late transcription.

Authors:  I Barthelemy; J M Lázaro; E Méndez; R P Mellado; M Salas
Journal:  Nucleic Acids Res       Date:  1987-10-12       Impact factor: 16.971

10.  Transition from initiation to elongation in protein-primed phi 29 DNA replication: salt-dependent stimulation by the viral protein p6.

Authors:  L Blanco; A Bernad; M Salas
Journal:  J Virol       Date:  1988-11       Impact factor: 5.103
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