Literature DB >> 1934129

The kalilo linear senescence-inducing plasmid of Neurospora is an invertron and encodes DNA and RNA polymerases.

B S Chan1, D A Court, P J Vierula, H Bertrand.   

Abstract

The nucleotide sequence of kalilo, a linear plasmid that induces senescence in Neurospora by integrating into the mitochondrial chromosome, reveals structural and genetic features germane to the unique properties of this element. Prominent features include: (1) very long perfect terminal inverted repeats of nucleotide sequences which are devoid of obvious genetic functions, but are unusually GC-rich near both ends of the linear DNA; (2) small imperfect palindromes that are situated at the termini of the plasmid and are cognate with the active sites for plasmid integration into mtDNA; (3) two large, non-overlapping open-reading frames, ORF-1 and ORF-2, which are located on opposite strands of the plasmid and potentially encode RNA and DNA polymerases, respectively, and (4) a set of imperfect palindromes that coincide with similar structures that have been detected at more or less identical locations in the nucleotide sequences of other linear mitochondrial plasmids. The nucleotide sequence does not reveal a distinct gene that codes for the protein that is attached to the ends of the plasmid. However, a 335-amino acid, cryptic, N-terminal domain of the putative DNA polymerase might function as the terminal protein. Although the plasmid has been co-purified with nuclei and mitochondria, its nucleotide composition and codon usage indicate that it is a mitochondrial genetic element.

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Year:  1991        PMID: 1934129     DOI: 10.1007/bf00326237

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  80 in total

1.  A method for sequencing uncloned termini of linear plasmids.

Authors:  D A Court; H Bertrand
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

2.  Molecular cloning and physical characterization of a Brassica linear mitochondrial plasmid.

Authors:  T Turpen; S J Garger; M D Marks; L K Grill
Journal:  Mol Gen Genet       Date:  1987-09

3.  Nucleotide sequence and expression of the cloned gene of bacteriophage SP6 RNA polymerase.

Authors:  H Kotani; Y Ishizaki; N Hiraoka; A Obayashi
Journal:  Nucleic Acids Res       Date:  1987-03-25       Impact factor: 16.971

4.  The integrated forms of the S1 and S2 DNA elements of maize male sterile mitochondrial DNA are flanked by a large repeated sequence.

Authors:  D M Lonsdale; R D Thompson; T P Hodge
Journal:  Nucleic Acids Res       Date:  1981-08-11       Impact factor: 16.971

5.  The yeast linear DNA killer plasmids, pGKL1 and pGKL2, possess terminally attached proteins.

Authors:  Y Kikuchi; K Hirai; F Hishinuma
Journal:  Nucleic Acids Res       Date:  1984-07-25       Impact factor: 16.971

6.  The mechanism of adenovirus DNA replication and the characterization of replication proteins.

Authors:  J S Sussenbach; P C van der Vliet
Journal:  Curr Top Microbiol Immunol       Date:  1984       Impact factor: 4.291

7.  Intramolecular recombination as a source of mitochondrial chromosome heteromorphism in Neurospora.

Authors:  S R Gross; T S Hsieh; P H Levine
Journal:  Cell       Date:  1984-08       Impact factor: 41.582

8.  The DNA sequence and genetic organization of a Neurospora mitochondrial plasmid suggest a relationship to introns and mobile elements.

Authors:  F E Nargang; J B Bell; L L Stohl; A M Lambowitz
Journal:  Cell       Date:  1984-09       Impact factor: 41.582

9.  DNA sequence of the region in the genome of herpes simplex virus type 1 containing the genes for DNA polymerase and the major DNA binding protein.

Authors:  J P Quinn; D J McGeoch
Journal:  Nucleic Acids Res       Date:  1985-11-25       Impact factor: 16.971

10.  Structural and functional relationships between prokaryotic and eukaryotic DNA polymerases.

Authors:  A Bernad; A Zaballos; M Salas; L Blanco
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

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  39 in total

1.  Both open reading frames of the linear plasmid pMC3-2 from the ascomycete Morchella conica are transcribed in vivo.

Authors:  M Rohe; F Meinhardt
Journal:  Curr Genet       Date:  1992-12       Impact factor: 3.886

2.  Evidence that a 1.6 kilobase region of Neurospora mtDNA was derived by insertion of part of the LaBelle mitochondrial plasmid.

Authors:  F E Nargang; S Pande; J C Kennell; R A Akins; A M Lambowitz
Journal:  Nucleic Acids Res       Date:  1992-03-11       Impact factor: 16.971

3.  Evolution of linear plasmids.

Authors:  F Kempken; J Hermanns; H D Osiewacz
Journal:  J Mol Evol       Date:  1992-12       Impact factor: 2.395

4.  Phylogenetic relationships of linear, protein-primed replicating genomes.

Authors:  M Rohe; J Schründer; P Tudzynski; F Meinhardt
Journal:  Curr Genet       Date:  1992-02       Impact factor: 3.886

5.  Transcripts and translation products of a mitochondrial plasmid of Claviceps purpurea.

Authors:  K Gessner-Ulrich; P Tudzynski
Journal:  Curr Genet       Date:  1992-03       Impact factor: 3.886

6.  Identification and distribution of sequences having similarity to mitochondrial plasmids in mitochondrial genomes of filamentous fungi.

Authors:  Patrick Cahan; John C Kennell
Journal:  Mol Genet Genomics       Date:  2005-05-13       Impact factor: 3.291

7.  Suppression of cytoplasmic senescence in Neurospora.

Authors:  A J Griffiths; Y Xiao; R Barton; C Myers
Journal:  Curr Genet       Date:  1992-05       Impact factor: 3.886

8.  Genetic organization of a linear mitochondrial plasmid (mF) that promotes mitochondrial fusion in Physarum polycephalum.

Authors:  H Takano; S Kawano; T Kuroiwa
Journal:  Curr Genet       Date:  1994 Nov-Dec       Impact factor: 3.886

9.  Analysis of the structure and inheritance of a linear plasmid from the obligate biotrophic fungus Blumeria graminis f. sp. hordei.

Authors:  H Giese; M F Lyngkjaer; B M Stummann; M N Grell; S K Christiansen
Journal:  Mol Genet Genomics       Date:  2003-06-28       Impact factor: 3.291

10.  Two Neurospora mitochondrial plasmids encode DNA polymerases containing motifs characteristic of family B DNA polymerases but lack the sequence Asp-Thr-Asp.

Authors:  Q Li; F E Nargang
Journal:  Proc Natl Acad Sci U S A       Date:  1993-05-01       Impact factor: 11.205

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