Literature DB >> 3753780

Improved programs for DNA and protein sequence analysis on the IBM personal computer and other standard computer systems.

D W Mount, B Conrad.   

Abstract

We have previously described programs for a variety of types of sequence analysis (1-4). These programs have now been integrated into a single package. They are written in the standard C programming language and run on virtually any computer system with a C compiler, such as the IBM/PC and other computers running under the MS/DOS and UNIX operating systems. The programs are widely distributed and may be obtained from the authors as described below.

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Year:  1986        PMID： 3753780      PMCID： PMC339429          DOI： 10.1093/nar/14.1.443

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN： 0305-1048            Impact factor:   16.971


  4 in total

1.  Rapid and sensitive protein similarity searches.

Authors:  D J Lipman; W R Pearson
Journal:  Science       Date:  1985-03-22       Impact factor: 47.728

2.  Creating new restriction sites by silent changes in coding sequences.

Authors:  J W Little; D W Mount
Journal:  Gene       Date:  1984-12       Impact factor: 3.688

Review 3.  Analysis of biological sequences on small computers.

Authors:  L J Korn; C Queen
Journal:  DNA       Date:  1984-12

4.  Microcomputer programs for DNA sequence analysis.

Authors:  B Conrad; D W Mount
Journal:  Nucleic Acids Res       Date:  1982-01-11       Impact factor: 16.971
  4 in total
  27 in total

1.  Gene deletions causing human genetic disease: mechanisms of mutagenesis and the role of the local DNA sequence environment.

Authors:  M Krawczak; D N Cooper
Journal:  Hum Genet       Date:  1991-03       Impact factor: 4.132

2.  The cyanelle S10 spc ribosomal protein gene operon from Cyanophora paradoxa.

Authors:  C B Michalowski; B Pfanzagl; W Löffelhardt; H J Bohnert
Journal:  Mol Gen Genet       Date:  1990-11

3.  Drosophila ninaA gene encodes an eye-specific cyclophilin (cyclosporine A binding protein).

Authors:  S Schneuwly; R D Shortridge; D C Larrivee; T Ono; M Ozaki; W L Pak
Journal:  Proc Natl Acad Sci U S A       Date:  1989-07       Impact factor: 11.205

4.  Molecular structure of frizzled, a Drosophila tissue polarity gene.

Authors:  P N Adler; C Vinson; W J Park; S Conover; L Klein
Journal:  Genetics       Date:  1990-10       Impact factor: 4.562

5.  Predict7, a program for protein structure prediction.

Authors:  R S Cármenes; J P Freije; M M Molina; J M Martín
Journal:  Biochem Biophys Res Commun       Date:  1989-03-15       Impact factor: 3.575

6.  In organello replication and viral affinity of linear, extrachromosomal DNA of the ascomycete Ascobolus immersus.

Authors:  F Kempken; F Meinhardt; K Esser
Journal:  Mol Gen Genet       Date:  1989-09

7.  Nuclear-encoded chloroplast ribosomal protein L12 of Nicotiana tabacum: characterization of mature protein and isolation and sequence analysis of cDNA clones encoding its cytoplasmic precursor.

Authors:  G A Elhag; F J Thomas; T P McCreery; D P Bourque
Journal:  Nucleic Acids Res       Date:  1992-02-25       Impact factor: 16.971

8.  Regulation of the mRNA for monocyte-derived neutrophil-activating peptide in differentiating HL60 promyelocytes.

Authors:  J Kowalski; D T Denhardt
Journal:  Mol Cell Biol       Date:  1989-05       Impact factor: 4.272

9.  Transcription mapping of the Escherichia coli chromosome by electron microscopy.

Authors:  S L French; O L Miller
Journal:  J Bacteriol       Date:  1989-08       Impact factor: 3.490

10.  PatMaN: rapid alignment of short sequences to large databases.

Authors:  Kay Prüfer; Udo Stenzel; Michael Dannemann; Richard E Green; Michael Lachmann; Janet Kelso
Journal:  Bioinformatics       Date:  2008-05-08       Impact factor: 6.937
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