Literature DB >> 2539121

Predict7, a program for protein structure prediction.

R S Cármenes1, J P Freije, M M Molina, J M Martín.   

Abstract

We describe a program for protein sequence analysis which runs in IBM PC computers. Protein sequences are loaded from files in Mount-Conrad and Lipman-Pearson format. Seven features are analyzed: hydrophilicity, hydropathy, surface probability, side chain flexibility, antigenicity, secondary structure and N-glycosylation sites. Numeric results can be shown, printed or stored in files exportable to other programs. Graphics of up to four predictions can be displayed on the screen, printed out or plotted, with several definable options. This program has been designed to be fast, user-friendly and to be shared with the scientific community.

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Year:  1989        PMID： 2539121      PMCID： PMC7111062          DOI： 10.1016/0006-291x(89)90049-1

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN： 0006-291X            Impact factor:   3.575


  17 in total

1.  Prediction of sequential antigenic regions in proteins.

Authors:  G W Welling; W J Weijer; R van der Zee; S Welling-Wester
Journal:  FEBS Lett       Date:  1985-09-02       Impact factor: 4.124

2.  Sequence and N-terminal processing of the transmembrane protein E1 of the coronavirus transmissible gastroenteritis virus.

Authors:  H Laude; D Rasschaert; J C Huet
Journal:  J Gen Virol       Date:  1987-06       Impact factor: 3.891

3.  Exploiting the insights from protein structure.

Authors:  B Jasny
Journal:  Science       Date:  1988-05-06       Impact factor: 47.728

4.  Improved tools for biological sequence comparison.

Authors:  W R Pearson; D J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  1988-04       Impact factor: 11.205

5.  Improved programs for DNA and protein sequence analysis on the IBM personal computer and other standard computer systems.

Authors:  D W Mount; B Conrad
Journal:  Nucleic Acids Res       Date:  1986-01-10       Impact factor: 16.971

6.  Prediction of protein antigenic determinants from amino acid sequences.

Authors:  T P Hopp; K R Woods
Journal:  Proc Natl Acad Sci U S A       Date:  1981-06       Impact factor: 11.205

Review 7.  Synthesis and processing of asparagine-linked oligosaccharides.

Authors:  S C Hubbard; R J Ivatt
Journal:  Annu Rev Biochem       Date:  1981       Impact factor: 23.643

8.  Conformation of amino acid side-chains in proteins.

Authors:  J Janin; S Wodak
Journal:  J Mol Biol       Date:  1978-11-05       Impact factor: 5.469

9.  Induction of hepatitis A virus-neutralizing antibody by a virus-specific synthetic peptide.

Authors:  E A Emini; J V Hughes; D S Perlow; J Boger
Journal:  J Virol       Date:  1985-09       Impact factor: 5.103

10.  Sequence and topology of a model intracellular membrane protein, E1 glycoprotein, from a coronavirus.

Authors:  J Armstrong; H Niemann; S Smeekens; P Rottier; G Warren
Journal:  Nature       Date:  1984 Apr 19-25       Impact factor: 49.962
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  7 in total

1.  Pressure- and temperature-induced unfolding and aggregation of recombinant human interferon-gamma: a Fourier transform infrared spectroscopy study.

Authors:  Koen Goossens; Joost Haelewyn; Filip Meersman; Marc De Ley; Karel Heremans
Journal:  Biochem J       Date:  2003-03-01       Impact factor: 3.857

2.  Purification of a glutathione S-transferase that mediates fosfomycin resistance in bacteria.

Authors:  P Arca; C Hardisson; J E Suárez
Journal:  Antimicrob Agents Chemother       Date:  1990-05       Impact factor: 5.191

3.  The Drosophila fork head factor directly controls larval salivary gland-specific expression of the glue protein gene Sgs3.

Authors:  V Mach; K Ohno; H Kokubo; Y Suzuki
Journal:  Nucleic Acids Res       Date:  1996-06-15       Impact factor: 16.971

4.  Immunogenicity of cholera toxin B epitope inserted in Salmonella flagellin expressed on bacteria and administered as DNA vaccine.

Authors:  Neeraj Chauhan; Ravindra Kumar; Jitendra Badhai; Anju Preet; Pramod Kumar Yadava
Journal:  Mol Cell Biochem       Date:  2005-08       Impact factor: 3.396

5.  Expression and copper binding characteristics of Plasmodium falciparum cytochrome c oxidase assembly factor 11, Cox11.

Authors:  Abdulmalik Abdullahi Salman; J P Dean Goldring
Journal:  Malar J       Date:  2022-06-07       Impact factor: 3.469

6.  Phosphoethanolamine-N-methyltransferase is a potential biomarker for the diagnosis of P. knowlesi and P. falciparum malaria.

Authors:  Robert G E Krause; J P Dean Goldring
Journal:  PLoS One       Date:  2018-03-05       Impact factor: 3.240

7.  A Plasmodium falciparum copper-binding membrane protein with copper transport motifs.

Authors:  David L Choveaux; Jude M Przyborski; J P Dean Goldring
Journal:  Malar J       Date:  2012-11-29       Impact factor: 2.979
  7 in total

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