Literature DB >> 3737401

Nucleotide sequence of the human gamma cytoskeletal actin mRNA: anomalous evolution of vertebrate non-muscle actin genes.

H P Erba, P Gunning, L Kedes.   

Abstract

Two distinct, but iso-coding, gamma non-muscle actin cDNAs were isolated from an SV40-transformed human fibroblast library. The complete nucleotide sequence of the human gamma non-muscle actin cDNAs indicates that they may have arisen from polymorphic alleles. By using genomic DNA and cellular RNA transfer blots, we demonstrate that the 3' untranslated region (UTR) of the gamma actin mRNA consists of an evolutionarily conserved 5' and more divergent 3' segments. In fact, the conserved segment of the 3' UTR detects a single-copy sequence in the chicken genome and a 20S RNA transcript in chicken non-muscle tissues. The coding regions of these cDNAs were compared with those of other vertebrate non-muscle actin genes. Surprisingly, the percentage of silent base substitutions between the human beta and gamma actin coding regions is anomalously low and indicates greater sequence conservation than would be expected for a gene pair which arose during pre-avian evolution. We discuss gene conversion and recent selective pressure as possible explanations of the apparently anomalous evolution of the gamma non-muscle actin gene.

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Year:  1986        PMID: 3737401      PMCID: PMC311540          DOI: 10.1093/nar/14.13.5275

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  45 in total

1.  Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene.

Authors:  M Grunstein; D S Hogness
Journal:  Proc Natl Acad Sci U S A       Date:  1975-10       Impact factor: 11.205

2.  Identification and characterization of multiple forms of actin.

Authors:  J I Garrels; W Gibson
Journal:  Cell       Date:  1976-12       Impact factor: 41.582

3.  Detection of specific sequences among DNA fragments separated by gel electrophoresis.

Authors:  E M Southern
Journal:  J Mol Biol       Date:  1975-11-05       Impact factor: 5.469

4.  Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.

Authors:  P W Rigby; M Dieckmann; C Rhodes; P Berg
Journal:  J Mol Biol       Date:  1977-06-15       Impact factor: 5.469

5.  Mammalian cytoplasmic actins are the products of at least two genes and differ in primary structure in at least 25 identified positions from skeletal muscle actins.

Authors:  J Vandekerckhove; K Weber
Journal:  Proc Natl Acad Sci U S A       Date:  1978-03       Impact factor: 11.205

6.  Histone gene expression during sea urchin embryogenesis: isolation and characterization of early and late messenger RNAs of Strongylocentrotus purpuratus by gene-specific hybridization and template activity.

Authors:  G Childs; R Maxson; L H Kedes
Journal:  Dev Biol       Date:  1979-11       Impact factor: 3.582

7.  Number and evolutionary conservation of alpha- and beta-tubulin and cytoplasmic beta- and gamma-actin genes using specific cloned cDNA probes.

Authors:  D W Cleveland; M A Lopata; R J MacDonald; N J Cowan; W J Rutter; M W Kirschner
Journal:  Cell       Date:  1980-05       Impact factor: 41.582

Review 8.  Biochemical evolution.

Authors:  A C Wilson; S S Carlson; T J White
Journal:  Annu Rev Biochem       Date:  1977       Impact factor: 23.643

9.  Partial amino acid sequence of brain actin and its homology with muscle actin.

Authors:  R C Lu; M Elzinga
Journal:  Biochemistry       Date:  1977-12-27       Impact factor: 3.162

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  58 in total

1.  Immunosuppressants FK506 and rapamycin have different effects on the biosynthesis of cytoplasmic actin during the early period of T cell activation.

Authors:  S Miyamoto; B Safer
Journal:  Biochem J       Date:  1999-12-15       Impact factor: 3.857

2.  A functional role for intra-axonal protein synthesis during axonal regeneration from adult sensory neurons.

Authors:  J Q Zheng; T K Kelly; B Chang; S Ryazantsev; A K Rajasekaran; K C Martin; J L Twiss
Journal:  J Neurosci       Date:  2001-12-01       Impact factor: 6.167

3.  Codon usage changes and sequence dissimilarity between human and rat.

Authors:  D Mouchiroud; C Gautier
Journal:  J Mol Evol       Date:  1990-08       Impact factor: 2.395

4.  Retroviral and pseudogene insertion sites reveal the lineage of human salivary and pancreatic amylase genes from a single gene during primate evolution.

Authors:  L C Samuelson; K Wiebauer; C M Snow; M H Meisler
Journal:  Mol Cell Biol       Date:  1990-06       Impact factor: 4.272

5.  Structure, chromosome location, and expression of the human smooth muscle (enteric type) gamma-actin gene: evolution of six human actin genes.

Authors:  T Miwa; Y Manabe; K Kurokawa; S Kamada; N Kanda; G Bruns; H Ueyama; T Kakunaga
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

6.  Expression of actin and myosin genes during PC12 cell differentiation.

Authors:  R C Henke; O Tolhurst; J W Sentry; P Gunning; P L Jeffrey
Journal:  Neurochem Res       Date:  1991-06       Impact factor: 3.996

7.  An STS in the human cytoskeletal gamma-actin gene.

Authors:  B C Freeman; J C States
Journal:  Nucleic Acids Res       Date:  1991-09-25       Impact factor: 16.971

8.  Evolution of actin gene families of sea urchins.

Authors:  H Fang; B P Brandhorst
Journal:  J Mol Evol       Date:  1994-10       Impact factor: 2.395

9.  Nucleolar localization of myc transcripts.

Authors:  V C Bond; B Wold
Journal:  Mol Cell Biol       Date:  1993-06       Impact factor: 4.272

10.  Alterations in the expression of the beta-cytoplasmic and the gamma-smooth muscle actins in hypertrophied urinary bladder smooth muscle.

Authors:  Y S Kim; Z Wang; R M Levin; S Chacko
Journal:  Mol Cell Biochem       Date:  1994-02-23       Impact factor: 3.396

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