Literature DB >> 3718936

Wavelength dependence for the photoreversal of a psoralen-DNA cross-link.

G D Cimino, Y B Shi, J E Hearst.   

Abstract

We report an action spectrum for the photoreversal of a psoralen cross-link joining two self-complementary DNA oligonucleotides. The cross-link was formed between two thymines (T) on opposite strands of the DNA oligomers and 4'-(hydroxymethyl)-4,5',8-trimethylpsoralen (HMT). For comparison, we also present an action spectrum for the photoreversal of the isolated diadduct T-HMT-T. The wavelength dependence for the diadduct photoreversal parallels its absorption spectrum. Both the diadduct and the cross-linked DNA can be photoreversed by exposure to light with wavelengths between 240 and 313 nm. We did not observe photoreversal at 334 nm or above. At least two distinct absorption bands appear to contribute to photoreversal. We measured a quantum yield of 0.16 for photoreversal of the isolated diadduct at wavelengths between 240 and 266 nm. For wavelengths above 280 nm, the quantum yield is 0.30. We also observed a preferential photoreversal at the furan end of the psoralen in the T-HMT-T diadduct. In contrast, the cross-linked DNA oligonucleotides preferentially photoreversed at the pyrone end of the psoralen adduct. The rate constant for photoreversal of the cross-linked DNA is larger than that for the isolated diadduct at wavelengths below 300 nm.

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Year:  1986        PMID: 3718936     DOI: 10.1021/bi00358a042

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  16 in total

1.  Repairing the Sickle Cell mutation. III. Effect of irradiation wavelength on the specificity and type of photoproduct formed by a 3'-terminal psoralen on a third strand directed to the mutant base pair.

Authors:  Steven L Broitman; Olga Amosova; Jacques R Fresco
Journal:  Nucleic Acids Res       Date:  2003-08-15       Impact factor: 16.971

2.  Genome-wide Mapping of Drug-DNA Interactions in Cells with COSMIC (Crosslinking of Small Molecules to Isolate Chromatin).

Authors:  Graham S Erwin; Matthew P Grieshop; Devesh Bhimsaria; Asuka Eguchi; José A Rodríguez-Martínez; Aseem Z Ansari
Journal:  J Vis Exp       Date:  2016-01-20       Impact factor: 1.355

3.  Rapid Capture and Release of Nucleic Acids through a Reversible Photo-Cycloaddition Reaction in a Psoralen-Functionalized Hydrogel.

Authors:  Yizhe Zhang; Peggy P Y Chan; Amy E Herr
Journal:  Angew Chem Int Ed Engl       Date:  2018-01-24       Impact factor: 15.336

4.  Photoswitchable formation of a DNA interstrand cross-link by a coumarin-modified nucleotide.

Authors:  Mohammad Mojibul Haque; Huabing Sun; Shuo Liu; Yinsheng Wang; Xiaohua Peng
Journal:  Angew Chem Int Ed Engl       Date:  2014-05-19       Impact factor: 15.336

5.  Methods for the large-scale synthesis of psoralen furan-side monoadducts and diadducts.

Authors:  H P Spielmann; S S Sastry; J E Hearst
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-15       Impact factor: 11.205

6.  Evidence for structural deformation of the DNA helix by a psoralen diadduct but not by a monoadduct.

Authors:  Y B Shi; J Griffith; H Gamper; J E Hearst
Journal:  Nucleic Acids Res       Date:  1988-09-26       Impact factor: 16.971

7.  Replication-Dependent Unhooking of DNA Interstrand Cross-Links by the NEIL3 Glycosylase.

Authors:  Daniel R Semlow; Jieqiong Zhang; Magda Budzowska; Alexander C Drohat; Johannes C Walter
Journal:  Cell       Date:  2016-09-29       Impact factor: 41.582

8.  The effects of covalent additions of a psoralen on transcription by E. coli RNA polymerase.

Authors:  Y B Shi; H Gamper; J E Hearst
Journal:  Nucleic Acids Res       Date:  1987-09-11       Impact factor: 16.971

9.  Site-specific targeting of psoralen photoadducts with a triple helix-forming oligonucleotide: characterization of psoralen monoadduct and crosslink formation.

Authors:  F P Gasparro; P A Havre; G A Olack; E J Gunther; P M Glazer
Journal:  Nucleic Acids Res       Date:  1994-07-25       Impact factor: 16.971

10.  Inhibition of gene expression by triple helix-directed DNA cross-linking at specific sites.

Authors:  M Grigoriev; D Praseuth; A L Guieysse; P Robin; N T Thuong; C Hélène; A Harel-Bellan
Journal:  Proc Natl Acad Sci U S A       Date:  1993-04-15       Impact factor: 11.205

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