Literature DB >> 3708098

A cooperative model for ligand binding to biological macromolecules as applied to oxygen carriers.

M Brunori, M Coletta, E Di Cera.   

Abstract

This paper presents a model describing the thermodynamics of cooperative ligand binding to multimeric biological macromolecules and integrating some of the features of the two-state and induced-fit models. The protein is taken to be partitioned into a number of noninteracting functional constellations, each one existing in two possible quaternary conformations. Furthermore, the model postulates that a functional constellation is organized in several subsets of sites (called cooperons), in which subunits interact according to an induced-fit mechanism. In the present version the number of subunits forming a cooperon has been limited to two and the total number of parameters used for fitting experimental data is four, all having a precise physical meaning. Although the present application is limited to oxygen-carrying proteins (hemoglobins, hemocyanins, erythrocruorins), the model appears suitable to describe other biological macromolecules with functional interactions.

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Year:  1986        PMID: 3708098     DOI: 10.1016/0301-4622(86)85006-2

Source DB:  PubMed          Journal:  Biophys Chem        ISSN: 0301-4622            Impact factor:   2.352


  7 in total

Review 1.  Protein dynamics explain the allosteric behaviors of hemoglobin.

Authors:  Takashi Yonetani; Monique Laberge
Journal:  Biochim Biophys Acta       Date:  2008-05-08

2.  Allosteric effectors do not alter the oxygen affinity of hemoglobin crystals.

Authors:  A Mozzarelli; C Rivetti; G L Rossi; W A Eaton; E R Henry
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

3.  Experiments on Hemoglobin in Single Crystals and Silica Gels Distinguish among Allosteric Models.

Authors:  Eric R Henry; Andrea Mozzarelli; Cristiano Viappiani; Stefania Abbruzzetti; Stefano Bettati; Luca Ronda; Stefano Bruno; William A Eaton
Journal:  Biophys J       Date:  2015-05-30       Impact factor: 4.033

4.  Experimental basis for a new allosteric model for multisubunit proteins.

Authors:  Cristiano Viappiani; Stefania Abbruzzetti; Luca Ronda; Stefano Bettati; Eric R Henry; Andrea Mozzarelli; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2014-08-19       Impact factor: 11.205

5.  Cooperative free energies for nested allosteric models as applied to human hemoglobin.

Authors:  S J Gill; C H Robert; M Coletta; E Di Cera; M Brunori
Journal:  Biophys J       Date:  1986-10       Impact factor: 4.033

Review 6.  S-Nitrosothiol measurements in biological systems.

Authors:  Andrew Gow; Allan Doctor; Joan Mannick; Benjamin Gaston
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2007-02-25       Impact factor: 3.205

7.  Spontaneous quaternary and tertiary T-R transitions of human hemoglobin in molecular dynamics simulation.

Authors:  Jochen S Hub; Marcus B Kubitzki; Bert L de Groot
Journal:  PLoS Comput Biol       Date:  2010-05-06       Impact factor: 4.475

  7 in total

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