Literature DB >> 3703681

Interaction of transition metal ions with Z form poly d(A-C).poly d(G-T) and poly d(A-T) studied by I.R. spectroscopy.

S Adam, P Bourtayre, J Liquier, E Taillandier.   

Abstract

Interactions between Ni2+, Co2+ and purine bases have been studied by I.R. spectroscopy in the case of double stranded regularly alternating purine-pyrimidine polynucleotides poly d(A-T), poly d(A-C).poly d(G-T) and poly d(G-C). The spectra of polynucleotide films have been recorded in hydration and salt content conditions which correspond to the obtention of the classical right-handed (A,B) and left-handed (Z) helical conformations. Selective deuteration of the 8C site of purines has been obtained and is used to detect interactions between the transition metal ions and the adenine or guanine bases. The spectral region between 1500 and 1250 cm-1 corresponding to base in-plane vibrations and involving also the glycosidic linkage torsion is discussed in detail. The selective interaction between the transition metal ion and the 7N site of the purine base is considered to be partly responsible for the stabilization of the base in a syn conformation, which favours the adoption by the polynucleotide (poly d(G-C), poly d(A-C).poly d(G-T) or poly d(A-T)) of a Z type conformation.

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Year:  1986        PMID: 3703681      PMCID: PMC339788          DOI: 10.1093/nar/14.8.3501

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

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Authors:  D R DAVIES; R L BALDWIN
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Authors:  G J Thomas; J Livramento
Journal:  Biochemistry       Date:  1975-11-18       Impact factor: 3.162

3.  The conformation of C-DNA.

Authors:  S Arnott; E Selsing
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4.  Conformational dependence of the Raman scattering intensities from polynucleotides.

Authors:  E W Small; W L Peticolas
Journal:  Biopolymers       Date:  1971       Impact factor: 2.505

5.  Molecular structure of a left-handed double helical DNA fragment at atomic resolution.

Authors:  A H Wang; G J Quigley; F J Kolpak; J L Crawford; J H van Boom; G van der Marel; A Rich
Journal:  Nature       Date:  1979-12-13       Impact factor: 49.962

6.  Conformations and structural transitions in polydeoxynucleotides.

Authors:  J Pilet; J Blicharski; J Brahms
Journal:  Biochemistry       Date:  1975-05-06       Impact factor: 3.162

7.  Nature of conformational changes in poly[d(A-T)-d(A-T)] in the premelting region.

Authors:  S Brahms; J Brahms; K E Van Holde
Journal:  Proc Natl Acad Sci U S A       Date:  1976-10       Impact factor: 11.205

8.  Comparison of poly(dG-dC).poly(dG-dC) conformations in oriented films and in solution.

Authors:  J Pilet; M Leng
Journal:  Proc Natl Acad Sci U S A       Date:  1982-01       Impact factor: 11.205

9.  The high salt form of poly(dG-dC).poly(dG-dC) is left-handed Z-DNA: Raman spectra of crystals and solutions.

Authors:  T J Thamann; R C Lord; A H Wang; A Rich
Journal:  Nucleic Acids Res       Date:  1981-10-24       Impact factor: 16.971

10.  Effects of methylation on a synthetic polynucleotide: the B--Z transition in poly(dG-m5dC).poly(dG-m5dC).

Authors:  M Behe; G Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  1981-03       Impact factor: 11.205

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  10 in total

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Authors:  C Paris; F Geinguenaud; C Gouyette; J Liquier; J Lacoste
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2.  Structure and drug interactions of parallel-stranded DNA studied by infrared spectroscopy and fluorescence.

Authors:  H Fritzsche; A Akhebat; E Taillandier; K Rippe; T M Jovin
Journal:  Nucleic Acids Res       Date:  1993-11-11       Impact factor: 16.971

3.  Hydration effects of Ni(2+) binding to synthetic polynucleotides with regularly alternating purine-pyrimidine sequences.

Authors:  B I Kankia
Journal:  Nucleic Acids Res       Date:  2000-02-15       Impact factor: 16.971

4.  Vacuum UV circular dichroism is diagnostic for the left-handed Z form of poly [d(A-C).d(G-T)] and other polydeoxynucleotides.

Authors:  J H Riazance; W C Johnson; L P McIntosh; T M Jovin
Journal:  Nucleic Acids Res       Date:  1987-09-25       Impact factor: 16.971

5.  Energetics of Z-DNA formation in poly d(A-T), poly d(G-C), and poly d(A-C) poly d(G-T).

Authors:  H H Klump; E Schmid; M Wosgien
Journal:  Nucleic Acids Res       Date:  1993-05-25       Impact factor: 16.971

6.  Cobalt hexammine induced tautomeric shift in Z-DNA: the structure of d(CGCGCA)*d(TGCGCG) in two crystal forms.

Authors:  S Thiyagarajan; S S Rajan; N Gautham
Journal:  Nucleic Acids Res       Date:  2004-11-08       Impact factor: 16.971

7.  Spectroscopic studies of chimeric DNA-RNA and RNA 29-base intramolecular triple helices.

Authors:  J Liquier; E Taillandier; R Klinck; E Guittet; C Gouyette; T Huynh-Dinh
Journal:  Nucleic Acids Res       Date:  1995-05-25       Impact factor: 16.971

8.  Z form of poly d(A-C).poly d(G-T) in solution studied by Raman spectroscopy.

Authors:  J P Ridoux; J Liquier; E Taillandier
Journal:  Nucleic Acids Res       Date:  1987-07-24       Impact factor: 16.971

9.  Investigation on the Interactions of NiCR and NiCR-2H with DNA.

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Journal:  Bioinorg Chem Appl       Date:  2010-06-30       Impact factor: 7.778

10.  Normal coordinate analysis of 2'-deoxythymidine and 2'-deoxyadenosine.

Authors:  R Letellier; M Ghomi; E Taillandier
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  10 in total

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