| Literature DB >> 36247965 |
Ewelina Maculewicz1, Andrzej Mastalerz1, Bożena Antkowiak2, Oktawiusz Antkowiak2, Aleksandra Garbacz3, Ewa Szarska2, Paweł Rusin4, Anna Cywińska5, Agnieszka Białek6, Paweł Cięszczyk7.
Abstract
The main aim of this study was to investigate the association between 5 polymorphisms of the interleukin 10 (IL10) gene and body composition parameters in physically active young men. A cohort of 131 young men was enrolled and the following IL10 single-nucleotide polymorphisms (SNPs) were analysed: rs1518111, rs1878672, rs3024496, rs3024498 and rs3024505. The subjects were divided into groups depending on obesity parameters: body mass index (BMI) and percentage of body fat tissue (fat %). Statistical analysis was conducted for alleles, genotypes and haplotypes, and an association between SNPs and body composition parameters was analysed using four genetic models: dominant, recessive, codominant and overdominant mode of inheritance (MOI). The only statistically significant result in polymorphisms was found for rs3024505 in the over-dominant model with BMI (p = 0.04) and with fat % (p = 0.02). The haplo.score function showed an association between BMI and CCGTA (respectively) haplotype in the additive model (score = -2.00, p = 0.04) and in the dominant model (score = -2.30, p = 0.02). The obtained results indicate a statistically significant contribution of selected IL10 polymorphisms in the regulation of body weight in physically active individuals.Entities:
Keywords: BMI; Fat percentage; Genetic polymorphisms; Haplotype; IL10; Interleukin
Year: 2022 PMID: 36247965 PMCID: PMC9536378 DOI: 10.5114/biolsport.2023.118336
Source DB: PubMed Journal: Biol Sport ISSN: 0860-021X Impact factor: 4.606
Anthropometry and body composition of the subjects for BMI and fat %.
| Group | All (n = 131) | OVERBMI (n = 39) | CONBMI (n = 92) | OVERFat (n = 20) | CONFat (n = 111) |
|---|---|---|---|---|---|
| Age | 22.4 ± 2.2 | 22.6 ± 2.5 | 22.3 ± 2.1 | 22.30 ± 2.3 | 22.4 ± 2.2 |
| Height [cm] | 179.9 ± 6.6 | 180.5 ± 7.3 | 179.6 ± 6.3 | 181.10 ± 8.3 | 179.6 ± 6.2 |
| Weight [kg] | 78.9 ± 9.8 | 88.7 ± 8.5 | 74.7 ± 6.9 | 91.2 ± 9.6 | 76.7 ± 8.0 |
| BMI [pts] | 24.3 ± 2.4 | 27.2 ± 1.6 | 23.1 ± 1.4 | 27.8 ± 1.9 | 23.7 ± 1.8 |
| Fat % | 16.3 ± 4.2 | 20.9 ± 2.9 | 14.3 ± 2.8 | 22.9 ± 2.4 | 15.1 ± 3.2 |
| Total water [%] | 60.6 ± 3.4 | 57.1 ± 2.7 | 62.1 ± 2.5 | 55.5 ± 2.2 | 61.5 ± 2.6 |
Note:
statistically significant (p < 0.05) difference in Student T test between CON and OVER groups. BMI – body mass index. CON – control group. OVER – experimental group.
FIG. 1IL10 gene (Chromosome 1).
Selected IL10 gene single nucleotide polymorphism and their variations.
| SNP ID (RefSNPs) | Chromosomal position | Variation | Gene location | Functional consequence |
|---|---|---|---|---|
| rs1518111 | 1:206771300 (GRCh38) | c.T > C | Intron | upstream transcript variant |
| rs1878672 | 1:206770368 (GRCh38) | c.G > C | Intron | upstream transcript variant |
| rs3024496 | 1:206768519 (GRCh38) | c.A > G | non coding transcript | 3 prime UTR variant |
| rs3024498 | 1:206768184 (GRCh38) | c.T > C | non coding transcript | 3 prime UTR variant |
| rs3024505 | 1:206766559 (GRCh38) | c.G > A | downstream regulatory sequence | expression influence |
Note: RefSNPs – Reference Single Nucleotide Polymorphism.
Minor allele frequencies (MAF) and Hardy-Weinberg expectations (HWE).
| SNP | MAF(%) | OVERBMI + CONBMI | OVERBMI | CONBMI | OVERFat | CONFat |
|---|---|---|---|---|---|---|
|
| Allele T 26.72 | 1 | 0.66 | 0.79 | 0.59 | 0.81 |
|
| Allele C 45.42 | 0.16 | 0.17 | 0.54 | 0.05 | 0.57 |
|
| Allele G 44.66 | 0.11 | 0.17 | 0.30 | 0.05 | 0.34 |
|
| Allele C 22.48 | 0.08 | 0.03 | 0.59 | 0.54 | 0.15 |
|
| Allele A 16.79 | 0.53 | 0.41 | 0.18 | 0.15 | 0.19 |
Note:
statistically significant (p < 0.05). MAF – minor allele frequency.
Association analysis of the IL10 gene rs1518111 polymorphism with BMI.
| Genotypes and alleles | OVERBMI | CONBMI |
|---|---|---|
|
| 23 (59.0) | 47 (51.1) |
|
| 13 (33.3) | 39 (42.4) |
|
| 3 (7.70) | 6 (6.50) |
|
| 59 (75.6) | 133 (72.3) |
|
| 19 (24.4) | 51 (27.7) |
|
| ||
|
|
|
|
|
| C/C vs. C/T + T/T | 0.73 (0.34–1.55) p=0.41 |
|
| C/C + C/T vs. T/T | 1.19 (0.28–5.04) p=0.81 |
|
| C/C + T/T vs. C/T | 0.68 (0.31–1.49) p=0.33 |
|
| C/C vs. C/T | 1.02 (0.23–4.46) p=0.62 |
| C/C vs. T/T | 0.68 (0.31–1.52) p=0.62 | |
|
| C vs. T | 1.19 (0.63–2.33) p=0.68 |
OR – odds ratio. 95% CI – confidence intervals.
Association analysis between the IL10 gene rs3024505 polymorphism and BMI.
| Genotypes and alleles | OVERBMI | CONBMI |
|---|---|---|
|
| 31 (79.5) | 58 (63.0) |
|
| 7 (17.9) | 33 (35.9) |
|
| 1 (2.60) | 1 (1.10) |
|
| 69 (88.5) | 149 (81.0) |
|
| 9 (11.5) | 35 (19.0) |
|
| ||
|
|
| |
|
| G/G vs. A/G + A/A | 0.44 (0.18–1.07) p=0.06 |
|
| G/G + A/G vs. A/A | 2.39 (0.15–39.28) p=0.55 |
|
| G/G + A/A vs. A/G | 0.39 (0.16–0.98) p=0.04 |
|
| G/G vs. A/G | 0.40 (0.16–1.00) p=0.10 |
| G/G vs. A/A | 1.87 (0.11–30.95) p=0.10 | |
|
| G vs. A | 1.8 (0.7–4.49) p=0.19 |
OR – odds ratio. 95% CI – confidence intervals.
Association analysis of the IL10 gene rs3024505 polymorphism with fat %.
| Genotypes and alleles | OVERFat | CONFat |
|---|---|---|
|
| 17 (85.0) | 72 (64.9) |
|
| 2 (10.0) | 38 (34.2) |
|
| 1 (5.00) | 1 (0.90) |
|
| 36 (90.0) | 182 (82.0) |
|
| 4 (10.0) | 40 (18.0) |
|
| ||
|
|
|
|
|
| G/G vs. A/G + A/A | 0.33 (0.09–1.18) p=0.06 |
|
| G/G + A/G vs. A/A | 5.79 (0.35–96.57) p=0.25 |
|
| G/G + A/A vs. A/G | 0.21 (0.05–0.97) p=0.02 |
|
| G/G vs. A/G | 0.22 (0.05–1.02) p=0.05 |
| G/G vs. A/A | 4.24 (0.25–71.18)p=0.32 | |
|
| G vs. A | 1.97 (0.65–8.06) 0.31 |
OR – odds ratio. 95% CI – confidence intervals.
Haplotypes distribution and its association of IL10 with BMI.
| Haplotypes | Haplotype Frequencies % | additive(score = 17.00, p-value = 0.01) | dominant (score = 14.09, p-value = 0.03) | recessive (score = 0.43, p-value = 0.93) | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OVERBMI + CONBMI | OVERBMI | CONBMI | OR | 95% CI | score | p-value | score | p-value | score | p-value | ||||||
| C | C | G | T | A | 0.16 | 0.09 | 0.18 | 0.44 | 0.16 | 1.21 | -2.00 |
| -2.30 |
| NA | NA |
| T | G | A | T | G | 0.24 | 0.22 | 0.26 | 0.72 | 0.32 | 1.60 | -0.66 | 0.51 | -1.00 | 0.33 | 0.24 | 0.81 |
| C | C | G | C | G | 0.23 | 0.21 | 0.23 | 0.74 | 0.35 | 1.58 | -0.33 | 0.75 | -0.60 | 0.59 | 0.24 | 0.81 |
| C | C | G | T | G | 0.06 | 0.07 | 0.06 | 1.10 | 0.36 | 3.35 | 0.38 | 0.70 | -0.40 | 0.66 | NA | NA |
| T | G | A | C | G | 0.02 | 0.02 | 0.02 | 1.49 | 0.17 | 13.41 | 0.65 | 0.52 | 0.65 | 0.52 | NA | NA |
| C | G | A | T | G | 0.26 | 0.27 | 0.24 | 1.00 | NA | NA | 0.65 | 0.51 | 0.57 | 0.57 | 0.50 | 0.62 |
OR – odds ratio. 95% CI – confidence intervals. NA – not applicable.