| Literature DB >> 36233442 |
Joao Carlos Batista Liz1, Fernanda Genre1,2, Verónica Pulito-Cueto1,2, Sara Remuzgo-Martínez1,2, Diana Prieto-Peña1,2, Ana Márquez3, Norberto Ortego-Centeno4, María Teresa Leonardo1,5, Ana Peñalba1,5, Javier Narváez6, Luis Martín-Penagos7, Lara Belmar-Vega7, Cristina Gómez-Fernández1,8, José A Miranda-Filloy9, Luis Caminal-Montero10, Paz Collado11, Diego De Árgila12, Patricia Quiroga-Colina13, Esther F Vicente-Rabaneda13, Ana Triguero-Martínez13, Esteban Rubio14, Manuel León Luque14, Juan María Blanco-Madrigal15, Eva Galíndez-Agirregoikoa15, Javier Martín3, Oreste Gualillo16, Ricardo Blanco1,2, Santos Castañeda13, Miguel A González-Gay1,2,17,18, Raquel López-Mejías1,2.
Abstract
CD40, BLK and BANK1 genes involved in the development and signaling of B-cells are identified as susceptibility loci for numerous inflammatory diseases. Accordingly, we assessed the potential influence of CD40, BLK and BANK1 on the pathogenesis of immunoglobulin-A vasculitis (IgAV), predominantly a B-lymphocyte inflammatory condition. Three genetic variants within CD40 (rs1883832, rs1535045, rs4813003) and BLK (rs2254546, rs2736340, rs2618476) as well as two BANK1 polymorphisms (rs10516487, rs3733197), previously associated with inflammatory diseases, were genotyped in 382 Caucasian patients with IgAV and 955 sex- and ethnically matched healthy controls. No statistically significant differences were observed in the genotype and allele frequencies of CD40, BLK and BANK1 when IgAV patients and healthy controls were compared. Similar results were found when CD40, BLK and BANK1 genotypes or alleles frequencies were compared between patients with IgAV stratified according to the age at disease onset or to the presence/absence of gastrointestinal or renal manifestations. Moreover, no CD40, BLK and BANK1 haplotype differences were disclosed between patients with IgAV and healthy controls and between patients with IgAV stratified according to the clinical characteristics mentioned above. Our findings indicate that CD40, BLK and BANK1 do not contribute to the genetic background of IgAV.Entities:
Keywords: BANK1; BLK; CD40; Henoch–Schönlein purpura; IgA vasculitis; polymorphisms
Year: 2022 PMID: 36233442 PMCID: PMC9572210 DOI: 10.3390/jcm11195577
Source DB: PubMed Journal: J Clin Med ISSN: 2077-0383 Impact factor: 4.964
Main clinical characteristic of the 382 IgAV patients recruited in our study.
| % (n) | |
|---|---|
| Children (age ≤20 years)/adults (age >20 years) (n) | 296/86 |
| Percentage of females | 47.4 |
| Age at disease onset (years, median [IQR]) | 7 [ |
| Duration of follow up (years, median [IQR]) | 1 [ |
| Palpable purpura and/or maculopapular rash | 100 (382) |
| Arthralgia and/or arthritis | 55.5 (212) |
| GI manifestations (if “a” and/or “b”) | 53.1 (203) |
| (a) Bowel angina | 50.3 (192) |
| (b) GI bleeding | 16.8 (64) |
| Renal manifestations (if any of the following characteristics) | 36.1 (138) |
| (a) Hematuria 1 | 34.8 (133) |
| (b) Proteinuria 1 | 33.5 (128) |
| (c) Nephrotic syndrome 1 | 5.8 (22) |
| (d) Renal sequelae (persistent renal involvement) 2 | 6.8 (26) |
IgAV: IgA vasculitis; IQR: interquartile range; GI: gastrointestinal. 1 At any time over the clinical course of the disease; 2 at last follow up.
CD40, BLK and BANK1 genotype and allele frequencies in patients with IgAV and healthy controls.
| Change | Genotypes, % (n) | Allele Test1 | ||||||
|---|---|---|---|---|---|---|---|---|
|
| SNP | 1/2 | Sample Set | 1/1 | 1/2 | 2/2 | p | OR [95% CI] |
|
| rs1883832 | C/T | IgAV patients | 54.0 (205) | 36.8 (140) | 9.2 (35) | 0.69 | 1.04 [0.86–1.26] |
| Healthy controls | 53.1 (507) | 40.1 (383) | 6.8 (65) | |||||
| rs1535045 | C/T | IgAV patients | 53.6 (201) | 39.5 (148) | 6.9 (26) | 0.45 | 1.08 [0.88–1.31] | |
| Healthy controls | 56.8 (542) | 36.0 (344) | 7.2 (69) | |||||
| rs4813003 | C/T | IgAV patients | 77.9 (292) | 20.0 (75) | 2.1 (8) | 0.35 | 0.88 [0.68–1.15] | |
| Healthy controls | 75.5 (721) | 22.0 (210) | 2.5 (24) | |||||
|
| rs2254546 | G/A | IgAV patients | 74.1 (278) | 22.4 (84) | 3.5 (13) | 0.74 | 0.96 [0.75–1.22] |
| Healthy controls | 71.5 (683) | 26.6 (254) | 1.9 (18) | |||||
| rs2736340 | C/T | IgAV patients | 63.0 (238) | 31.7 (120) | 5.3 (20) | 0.60 | 0.95 [0.77–1.17] | |
| Healthy controls | 60.0 (573) | 35.8 (342) | 4.2 (40) | |||||
| rs2618476 | T/C | IgAV patients | 60.2 (228) | 34.3 (130) | 5.5 (21) | 0.69 | 0.96 [0.78–1.18] | |
| Healthy controls | 57.9 (553) | 37.4 (357) | 4.7 (45) | |||||
|
| rs10516487 | G/A | IgAV patients | 52.5 (200) | 40.2 (153) | 7.3 (28) | 0.80 | 0.98 [0.81–1.18] |
| Healthy controls | 51.2 (489) | 41.8 (399) | 7.0 (67) | |||||
| rs3733197 | G/A | IgAV patients | 50.0 (188) | 39.1 (147) | 10.9 (41) | 0.53 | 1.06 [0.88–1.28] | |
| Healthy controls | 50.0 (478) | 41.5 (396) | 8.5 (81) | |||||
IgAV: IgA vasculitis; SNP: single-nucleotide polymorphism; OR: odds ratio; CI: confidence interval.1 For the minor allele.
CD40, BLK and BANK1 genotype and allele frequencies in IgAV patients stratified according to clinical characteristics.
| Locus | SNP | Children (Age ≤20 Years) | GI Manifestations 1 | Renal Manifestations 2 | |||
|---|---|---|---|---|---|---|---|
| Yes | No | Yes | No | Yes | No | ||
|
| rs1883832 | ||||||
| CC | 53.7 (159) | 54.8 (46) | 52.2 (105) | 55.9 (100) | 54.4 (74) | 53.7 (131) | |
| CT | 38.2 (113) | 32.1 (27) | 39.3 (79) | 34.1 (61) | 36.8 (50) | 36.9 (90) | |
| TT | 8.1 (24) | 13.1 (11) | 8.5 (17) | 10.0 (18) | 8.8 (12) | 9.4 (23) | |
| C | 72.8 (431) | 70.8 (119) | 71.9 (289) | 72.9 (261) | 72.8 (198) | 72.1 (352) | |
| T | 27.2 (161) | 29.2 (49) | 28.1 (113) | 27.1 (97) | 27.2 (74) | 27.9 (136) | |
| rs1535045 | |||||||
| CC | 54.3 (158) | 51.2 (43) | 50.3 (100) | 57.4 (101) | 50.4 (68) | 55.4 (133) | |
| CT | 38.1 (111) | 44.0 (37) | 42.2 (84) | 36.4 (64) | 41.5 (56) | 38.3 (92) | |
| TT | 7.6 (22) | 4.8 (4) | 7.5 (15) | 6.2 (11) | 8.1 (11) | 6.3 (15) | |
| C | 73.4 (427) | 73.2 (123) | 71.4 (284) | 75.6 (266) | 71.1 (192) | 74.6 (358) | |
| T | 26.6 (155) | 26.8 (45) | 28.6 (114) | 24.4 (86) | 28.9 (78) | 25.4 (122) | |
| rs4813003 | |||||||
| CC | 77.0 (224) | 80.9 (68) | 75.2 (152) | 80.9 (140) | 81.7 (112) | 75.6 (180) | |
| CT | 21.3 (62) | 15.5 (13) | 21.8 (44) | 17.9 (31) | 16.1 (22) | 22.3 (53) | |
| TT | 1.7 (5) | 3.6 (3) | 3.0 (6) | 1.2 (2) | 2.2 (3) | 2.1 (5) | |
| C | 87.6 (510) | 88.7 (149) | 86.1 (348) | 89.9 (311) | 89.8 (246) | 86.8 (413) | |
| T | 12.4 (72) | 11.3 (19) | 13.9 (56) | 10.1 (35) | 10.2 (28) | 13.2 (63) | |
| rs2254546 | |||||||
|
| GG | 74.5 (216) | 73.0 (62) | 77.9 (155) | 69.9 (123) | 73.3 (99) | 74.6 (179) |
| GA | 22.1 (64) | 23.5 (20) | 18.6 (37) | 26.7 (47) | 23.7 (32) | 21.7 (52) | |
| AA | 3.4 (10) | 3.5 (3) | 3.5 (7) | 3.4 (6) | 3.0 (4) | 3.7 (9) | |
| G | 85.5 (496) | 84.7 (144) | 87.2 (347) | 83.2 (293) | 85.2 (230) | 85.4 (410) | |
| A | 14.5 (84) | 15.3 (26) | 12.8 (51) | 16.8 (59) | 14.8 (40) | 14.6 (70) | |
| rs2736340 | |||||||
| CC | 63.1 (185) | 62.4 (53) | 64.8 (129) | 60.9 (109) | 69.1 (94) | 59.5 (144) | |
| CT | 31.4 (92) | 32.9 (28) | 30.2 (60) | 33.5 (60) | 27.2 (37) | 34.3 (83) | |
| TT | 5.5 (16) | 4.7 (4) | 5.0 (10) | 5.6 (10) | 3.7 (5) | 6.2 (15) | |
| C | 78.8 (462) | 78.8 (134) | 79.9 (318) | 77.7 (278) | 82.7 (225) | 76.7 (371) | |
| T | 21.2 (124) | 21.2 (36) | 20.1 (80) | 22.3 (80) | 17.3 (47) | 23.3 (113) | |
| rs2618476 | |||||||
| TT | 60.2 (177) | 60.0 (51) | 61.9 (125) | 58.2 (103) | 65.0 (89) | 57.4 (139) | |
| TC | 33.3 (98) | 37.6 (32) | 34.1 (69) | 34.5 (61) | 32.1 (44) | 35.6 (86) | |
| CC | 6.5 (19) | 2.4 (2) | 4.0 (8) | 7.3 (13) | 2.9 (4) | 7.0 (17) | |
| T | 76.9 (452) | 78.8 (134) | 79.0 (319) | 75.4 (267) | 81.0 (222) | 75.2 (364) | |
| C | 23.1 (136) | 21.2 (36) | 21.0 (85) | 24.6 (87) | 19.0 (52) | 24.8 (120) | |
|
| rs10516487 | ||||||
| GG | 52.5 (155) | 52.3 (45) | 51.0 (103) | 54.2 (97) | 50.0 (69) | 53.9 (131) | |
| GA | 40.0 (118) | 40.7 (35) | 41.1 (83) | 39.1 (70) | 40.6 (56) | 39.9 (97) | |
| AA | 7.5 (22) | 7.0 (6) | 7.9 (16) | 6.7 (12) | 9.4 (13) | 6.2 (15) | |
| G | 72.5 (428) | 72.7 (125) | 71.5 (289) | 73.7 (264) | 70.3 (194) | 73.9 (359) | |
| A | 27.5 (162) | 27.3 (47) | 28.5 (115) | 26.3 (94) | 29.7 (82) | 26.1 (127) | |
| rs3733197 | |||||||
| GG | 48.6 (141) | 54.6 (47) | 47.5 (95) | 52.8 (93) | 46.0 (63) | 52.3 (125) | |
| GA | 41.4 (120) | 31.4 (27) | 43.5 (87) | 34.1 (60) | 41.6 (57) | 37.7 (90) | |
| AA | 10.0 (29) | 14.0 (12) | 9.0 (18) | 13.1 (23) | 12.4 (17) | 10.0 (24) | |
| G | 69.3 (402) | 70.3 (121) | 69.2 (277) | 69.9 (246) | 66.8 (183) | 71.1 (340) | |
| A | 30.7 (178) | 29.7 (51) | 30.8 (123) | 30.1 (106) | 33.2 (91) | 28.9 (138) | |
IgAV: IgA vasculitis; SNP: single-nucleotide polymorphism; GI: gastrointestinal; 1 Bowel angina and/or gastrointestinal bleeding; 2 hematuria, proteinuria or nephrotic syndrome at any time over the clinical course of the disease and/or renal sequelae (persistent renal involvement) at last follow up.
CD40, BLK and BANK1 haplotype analysis in patients with IgAV and healthy controls.
| CD40 | p | OR [95% CI] | ||
|---|---|---|---|---|
| rs1883832 | rs1535045 | rs4813003 | ||
| C | C | C | - | Ref. |
| C | T | C | 0.78 | 0.97 [0.76–1.23] |
| T | C | C | 0.22 | 0.85 [0.65–1.11] |
| T | C | T | 0.22 | 1.24 [0.87–1.81] |
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| G | C | T | - | Ref. |
| G | T | C | 0.10 | 1.22 [0.96–1.56] |
| A | C | T | 0.05 | 1.35 [0.99–1.86] |
| A | T | C | 0.44 | 0.85 [0.55–1.33] |
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| G | G | - | Ref. | |
| A | A | 0.90 | 1.01 [0.82–1.26] | |
| G | A | 0.06 | 0.74 [0.53–1.03] | |
| A | G | 0.66 | 0.92 [0.62–1.38] | |
IgAV: IgA vasculitis; OR: odds ratio; CI: confidence interval. Haplotypes of CD40, BLK and BANK1 with a frequency higher than 5% are displayed in the table.
CD40, BLK and BANK1 haplotype analysis in IgAV patients stratified according to clinical characteristics.
| Age of Onset | Presence/Absence of GI Manifestations 1 | Presence/Absence of Renal Manifestations 2 | ||||||
|---|---|---|---|---|---|---|---|---|
|
| p | OR [95% CI] | p | OR [95% CI] | p | OR [95% CI] | ||
| rs1883832 | rs1535045 | rs4813003 | ||||||
| C | C | C | - | Ref. | - | Ref. | - | Ref. |
| C | T | C | 0.64 | 0.89 [0.55–1.48] | 0.14 | 1.34 [0.89–2.04] | 0.12 | 1.37 [0.90–2.09] |
| T | C | C | 0.26 | 1.34 [0.78–2.35] | 0.84 | 1.04 [0.66–1.65] | 0.25 | 1.30 [0.81–2.06] |
| T | C | T | 0.17 | 0.63 [0.31–1.34] | 0.46 | 1.26 [0.65–2.47] | 0.15 | 0.60 [0.26–1.25] |
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| rs2254546 | rs2736340 | rs2618476 | ||||||
| G | C | T | - | Ref. | - | Ref. | - | Ref. |
| G | T | C | 0.31 | 1.30 [0.77–2.27] | 0.73 | 0.93 [0.61–1.43] | 0.07 | 0.66 [0.41–1.05] |
| A | C | T | 0.41 | 1.32 [0.67–2.81] | 0.44 | 0.81 [0.46–1.42] | 0.80 | 1.07 [0.60–1.89] |
| A | T | C | 0.51 | 0.78 [0.35–1.87] | 0.05 | 0.50 [0.22–1.05] | 0.66 | 0.85 [0.38–1.83] |
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| rs10516487 | rs3733197 | |||||||
| G | G | - | Ref. | - | Ref. | - | Ref. | |
| A | A | 0.96 | 0.99 [0.64–1.54] | 0.82 | 1.04 [0.72–1.51] | 0.24 | 1.25 [0.85–1.82] | |
| G | A | 0.40 | 1.33 [0.67–2.83] | 0.72 | 1.01 [0.63–1.93] | 0.51 | 1.20 [0.67–2.11] | |
| A | G | 0.57 | 1.26 [0.55–3.26] | 0.28 | 1.43 [0.71–2.93] | 0.82 | 1.08 [0.52–2.18] | |
IgAV: IgA vasculitis; GI: gastrointestinal; OR: odds ratio; CI: confidence interval. Haplotypes of CD40, BLK and BANK1 with a frequency higher than 5% are displayed in the table; 1 bowel angina and/or gastrointestinal bleeding; 2 hematuria, proteinuria, or nephrotic syndrome at any time over the clinical course of the disease and/or renal sequelae (persistent renal involvement) at last follow up.