Literature DB >> 36187262

Retinal optical coherence tomography image analysis by a restricted Boltzmann machine.

Mansooreh Ezhei1, Gerlind Plonka2, Hossein Rabbani1.   

Abstract

Optical coherence tomography (OCT) is an emerging imaging technique for ophthalmic disease diagnosis. Two major problems in OCT image analysis are image enhancement and image segmentation. Deep learning methods have achieved excellent performance in image analysis. However, most of the deep learning-based image analysis models are supervised learning-based approaches and need a high volume of training data (e.g., reference clean images for image enhancement and accurate annotated images for segmentation). Moreover, acquiring reference clean images for OCT image enhancement and accurate annotation of the high volume of OCT images for segmentation is hard. So, it is difficult to extend these deep learning methods to the OCT image analysis. We propose an unsupervised learning-based approach for OCT image enhancement and abnormality segmentation, where the model can be trained without reference images. The image is reconstructed by Restricted Boltzmann Machine (RBM) by defining a target function and minimizing it. For OCT image enhancement, each image is independently learned by the RBM network and is eventually reconstructed. In the reconstruction phase, we use the ReLu function instead of the Sigmoid function. Reconstruction of images given by the RBM network leads to improved image contrast in comparison to other competitive methods in terms of contrast to noise ratio (CNR). For anomaly detection, hyper-reflective foci (HF) as one of the first signs in retinal OCTs of patients with diabetic macular edema (DME) are identified based on image reconstruction by RBM and post-processing by removing the HFs candidates outside the area between the first and the last retinal layers. Our anomaly detection method achieves a high ability to detect abnormalities.
© 2022 Optica Publishing Group under the terms of the Optica Open Access Publishing Agreement.

Entities:  

Year:  2022        PMID: 36187262      PMCID: PMC9484437          DOI: 10.1364/BOE.458753

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.562


  26 in total

1.  Statistical Modeling of Retinal Optical Coherence Tomography.

Authors:  Zahra Amini; Hossein Rabbani
Journal:  IEEE Trans Med Imaging       Date:  2016-01-19       Impact factor: 10.048

2.  The contourlet transform: an efficient directional multiresolution image representation.

Authors:  Minh N Do; Martin Vetterli
Journal:  IEEE Trans Image Process       Date:  2005-12       Impact factor: 10.856

3.  Optical Coherence Tomography (OCT) in ophthalmology: introduction.

Authors:  James G Fujimoto; Wolfgang Drexler; Joel S Schuman; Christoph K Hitzenberger
Journal:  Opt Express       Date:  2009-03-02       Impact factor: 3.894

4.  Automatic segmentation of hyperreflective foci in OCT images.

Authors:  László Varga; Attila Kovács; Tamás Grósz; Géza Thury; Flóra Hadarits; Rózsa Dégi; József Dombi
Journal:  Comput Methods Programs Biomed       Date:  2019-06-17       Impact factor: 5.428

5.  Three-dimensional optical coherence tomography image denoising through multi-input fully-convolutional networks.

Authors:  Ashkan Abbasi; Amirhassan Monadjemi; Leyuan Fang; Hossein Rabbani; Yi Zhang
Journal:  Comput Biol Med       Date:  2019-01-19       Impact factor: 4.589

6.  Beyond a Gaussian Denoiser: Residual Learning of Deep CNN for Image Denoising.

Authors:  Kai Zhang; Wangmeng Zuo; Yunjin Chen; Deyu Meng; Lei Zhang
Journal:  IEEE Trans Image Process       Date:  2017-02-01       Impact factor: 10.856

7.  FFDNet: Toward a Fast and Flexible Solution for CNN based Image Denoising.

Authors:  Kai Zhang; Wangmeng Zuo; Lei Zhang
Journal:  IEEE Trans Image Process       Date:  2018-05-25       Impact factor: 10.856

8.  Segmentation Based Sparse Reconstruction of Optical Coherence Tomography Images.

Authors:  Leyuan Fang; Shutao Li; David Cunefare; Sina Farsiu
Journal:  IEEE Trans Med Imaging       Date:  2016-09-20       Impact factor: 10.048

9.  Optical coherence tomography image denoising using Gaussianization transform.

Authors: 
Journal:  J Biomed Opt       Date:  2017-08       Impact factor: 3.170

10.  Sparsity based denoising of spectral domain optical coherence tomography images.

Authors:  Leyuan Fang; Shutao Li; Qing Nie; Joseph A Izatt; Cynthia A Toth; Sina Farsiu
Journal:  Biomed Opt Express       Date:  2012-04-12       Impact factor: 3.732

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