| Literature DB >> 36152227 |
Jayne E Ellis1,2, Poppy Guest3, Vicki Lawson3, Julia Loecherbach3, Nigel Lindner3, Andrew McCulloch3.
Abstract
INTRODUCTION: Coronavirus disease 2019 (COVID-19) and influenza share similar symptoms, which hampers diagnosis. Given that they require different containment and treatment strategies, fast and accurate distinction between the two infections is needed. This study evaluates the sensitivity and specificity of the microfluidic antigen LumiraDx SARS-CoV-2 and Flu A/B Test for simultaneous detection of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and influenza A/B from a single nasal swab.Entities:
Keywords: COVID-19; Coinfection; Influenza test; Point-of-care; SARS-CoV-2 test
Year: 2022 PMID: 36152227 PMCID: PMC9510530 DOI: 10.1007/s40121-022-00696-8
Source DB: PubMed Journal: Infect Dis Ther ISSN: 2193-6382
Fig. 1Flow of participants in ASPIRE and INSPIRE studies. At the time influenza samples were being collected for the INSPIRE study, SARS-CoV-2 was only just beginning to emerge and access to PCR methods for SARS-CoV-2 identification was restricted. We were able to use the Quidel Lyra SARS-CoV-2 Assay for only 44 of the collected influenza samples. None of them tested positive for SARS-CoV-2. Moreover, remnant samples from the ASPIRE study were not available for additional influenza A/B testing. DSSO, days since symptom onset
SARS-CoV-2 detection performance measures for the LumiraDx SARS-CoV-2 and Flu A/B Test
| Measure | Estimate | 95% confidence interval | |
|---|---|---|---|
| PPA (%) | 95.5 | 84.9 | 98.7 |
| NPA (%) | 96.0 | 90.9 | 98.3 |
| PPV (%) | 89.4 | 77.4 | 95.4 |
| NPV (%) | 98.3 | 94.2 | 99.5 |
| Prevalence (%) | 26.2 | 20.1 | 33.3 |
| OPA (% agreement) | 95.8 | 91.7 | 98.0 |
NPA, negative percent agreement; NPV, negative predictive value; OPA, overall percent agreement; PPA, positive percent agreement; PPV, positive predictive value; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2
SARS-CoV-2 detection sensitivity of the LumiraDx SARS-CoV-2 and Flu A/B Test across cycle threshold groupings
| Grouping | PPA (%) | 95% confidence interval of PPA (%) | ||
|---|---|---|---|---|
| Ct < 33 | 44 | 95.5 | 84.9 | 98.7 |
| Ct < 30 | 40 | 100 | 91.2 | 100 |
| Ct < 25 | 25 | 100 | 86.7 | 100 |
PPA, positive percent agreement; Ct, cycle threshold; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2
Fig. 2Cycle threshold ranges detected for positive samples of SARS-CoV-2, influenza A and influenza B using the LumiraDx SARS-CoV-2 and Flu A/B Test. SARS-CoV-2, severe acute respiratory syndrome coronavirus 2
Fig. 3SARS-CoV-2 detection sensitivity of the LumiraDx SARS-CoV-2 and Flu A/B Test across days since symptom onset. PPA, positive percent agreement
Influenza A detection performance measures for the LumiraDx SARS-CoV-2 and Flu A/B Test
| Measure | Estimate | 95% confidence interval | |
|---|---|---|---|
| PPA (%) | 83.3 | 66.4 | 92.7 |
| NPA (%) | 97.7 | 93.4 | 99.2 |
| PPV (%) | 89.3 | 72.8 | 96.3 |
| NPV (%) | 96.2 | 91.4 | 98.4 |
| Prevalence (%) | 18.9 | 13.5 | 25.7 |
| OPA (% agreement) | 95.0 | 90.4 | 97.4 |
NPA, negative percent agreement; NPV, negative predictive value; OPA, overall percent agreement; PPA, positive percent agreement; PPV, positive predictive value; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2
Influenza A and B detection sensitivity of the LumiraDx SARS-CoV-2 and Flu A/B Test across cycle threshold groupings
| Grouping | PPA (%) | 95% confidence interval of PPA (%) | ||
|---|---|---|---|---|
| Influenza A | ||||
| Ct < 33 | 30 | 83.3 | 66.4 | 92.7 |
| Ct < 30 | 27 | 88.9 | 71.9 | 96.1 |
| Ct < 25 | 22 | 100 | 85.1 | 100.0 |
| Influenza B | ||||
| Ct < 33 | 30 | 80.0 | 62.7 | 90.5 |
| Ct < 30 | 27 | 85.2 | 67.5 | 94.1 |
| Ct < 25 | 25 | 84.0 | 65.3 | 93.6 |
PPA, positive percent agreement; Ct, cycle threshold; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2
Influenza B detection performance measures for the LumiraDx SARS-CoV-2 and Flu A/B Test
| Measure | Estimate | 95% confidence interval | |
|---|---|---|---|
| PPA (%) | 80.0 | 62.7 | 90.5 |
| NPA (%) | 95.3 | 90.2 | 97.9 |
| PPV (%) | 80.0 | 62.7 | 90.5 |
| NPV (%) | 95.3 | 90.2 | 97.9 |
| Prevalence (%) | 18.9 | 13.5 | 25.7 |
| OPA (% agreement) | 92.5 | 87.3 | 95.6 |
NPA, negative percent agreement; NPV, negative predictive value; OPA, overall percent agreement; PPA, positive percent agreement; PPV, positive predictive value; SARS-CoV-2, severe acute respiratory syndrome coronavirus 2
| SARS-CoV-2, influenza A and influenza B share similar symptoms but require different containment and treatment strategies. |
| Differentiation between SARS-CoV-2, influenza A and influenza B would help healthcare professionals decide on appropriate containment and treatment strategies. |
| The LumiraDx SARS-CoV-2 and Flu A/B Test can be used to simultaneously detect and differentiate between SARS-CoV-2, influenza A and influenza B infections within 12 min. |
| This study evaluated the performance of the LumiraDx SARS-CoV-2 and Flu A/B Test. |
| A high agreement of the LumiraDx SARS-CoV-2 and Flu A/B Test with reference SARS-CoV-2, influenza A and influenza B RT-PCR tests was found. |